RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CAPZA2P47755 286 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 ARL4DP49703 201 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 PLCXD2Q0VAA5 305 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 DYRK1AQ13627 763 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 CBFBQ13951 182 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 COL13A1Q5TAT6 717 aaPredicted RBP9.75□□□□□ -0.85
VPS52-217ENST00000478934 EEF1A1P5Q5VTE0 462 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 LIPHQ8WWY8 451 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 OMA1Q96E52 524 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 ZNF578Q96N58 590 aaPredicted RBP9.75□□□□□ -0.85
VPS52-217ENST00000478934 INTS14Q96SY0 518 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 CLEC4MQ9H2X3 399 aaPredicted RBP9.75□□□□□ -0.85
VPS52-217ENST00000478934 SYNDIG1Q9H7V2 258 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 MRPL22Q9NWU5 206 aaKnown RBP9.75□□□□□ -0.85
VPS52-217ENST00000478934 SCP2D1Q9UJQ7 156 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 ASCC3Q8N3C0 2202 aaKnown RBP9.75□□□□□ -0.85
VPS52-217ENST00000478934 PYCARD-AS1I3L0S3 204 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 CD1AP06126 327 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 SPARCP09486 303 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 TACSTD2P09758 323 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 CTLA4P16410 223 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 CXCL2P19875 107 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 INSM1Q01101 510 aaPredicted RBP9.75□□□□□ -0.85
VPS52-217ENST00000478934 HSF2Q03933 536 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 MFGE8Q08431 387 aaPredicted RBP9.75□□□□□ -0.85
VPS52-217ENST00000478934 SMAD2Q15796 467 aaKnown RBP9.75□□□□□ -0.85
VPS52-217ENST00000478934 C14orf28Q4W4Y0 310 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 FGD2Q7Z6J4 655 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 MEIOBQ8N635 442 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 OR5M1Q8NGP8 315 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 ELMOD3Q96FG2 381 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 DPYSL5Q9BPU6 564 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 TBL1XR1Q9BZK7 514 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 VN1R1Q9GZP7 353 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 LAT2Q9GZY6 243 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 ZMAT3Q9HA38 289 aaKnown RBP9.75□□□□□ -0.85
VPS52-217ENST00000478934 ZNF224Q9NZL3 707 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 HRH3Q9Y5N1 445 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 FER1L5A0AVI2 2057 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 RTTNQ86VV8 2226 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 TRBV5-5A0A0J9YX44 114 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 M0R233 179 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 PDCD5O14737 125 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 SUSD5O60279 629 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 TXNDC12O95881 172 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 RENP00797 406 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 OPN1LWP04000 364 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 PDGFAP04085 211 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 RLN1P04808 185 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 CCKBRP32239 447 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 ART1P52961 327 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 PCGF3Q3KNV8 242 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 FAM69BQ5VUD6 431 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 HACD4Q5VWC8 232 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 SLC6A19Q695T7 634 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 GPR139Q6DWJ6 353 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 OR7E24Q6IFN5 339 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 BPHLQ86WA6 291 aaPredicted RBP9.74□□□□□ -0.85
VPS52-217ENST00000478934 C17orf82Q86X59 251 aaPredicted RBP9.74□□□□□ -0.85
VPS52-217ENST00000478934 ADGRG3Q86Y34 549 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 PLPP7Q8NBV4 271 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 ADAMTS18Q8TE60 1221 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 METTL21AQ8WXB1 218 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 HGDQ93099 445 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 ZDHHC12Q96GR4 267 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 MED30Q96HR3 178 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 KLHL15Q96M94 604 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 TRAF4Q9BUZ4 470 aaPredicted RBP9.74□□□□□ -0.85
VPS52-217ENST00000478934 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.74□□□□□ -0.85
VPS52-217ENST00000478934 WWTR1Q9GZV5 400 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 PIPOXQ9P0Z9 390 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 B9D1Q9UPM9 204 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 MOKQ9UQ07 419 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 IGHV1OR21-1A0A087WYE8 117 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 LOC101059948A0A1B0GTJ6 334 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 A0A1B0GVI7 797 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 TCRBV16S1A1N1A0A5B0 115 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 ANKRD20A5PA0PJZ0 165 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 LMO7DNF2Z398 122 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 CTDSPLO15194 276 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 TSPAN2O60636 221 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 ITGA5P08648 1049 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 VSIG10L2P0DP72 767 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 BCKDHBP21953 392 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 PSMA6P60900 246 aaKnown RBP9.74□□□□□ -0.85
VPS52-217ENST00000478934 FMODQ06828 376 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 CSRP2Q16527 193 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 COL28A1Q2UY09 1125 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 ARHGAP40Q5TG30 622 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 HLA-DQA1Q5Y7H0 255 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 TMPRSS9Q7Z410 1059 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 LRRC20Q8TCA0 184 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 TSEN15Q8WW01 171 aaKnown RBP9.74□□□□□ -0.85
VPS52-217ENST00000478934 HAVCR1Q96D42 359 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 NUDT22Q9BRQ3 303 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 GINS4Q9BRT9 223 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 MFRPQ9BY79 579 aa9.74□□□□□ -0.85
VPS52-217ENST00000478934 EXOSC3Q9NQT5 275 aaKnown RBP9.74□□□□□ -0.85
VPS52-217ENST00000478934 MRPL39Q9NYK5 338 aaKnown RBP9.74□□□□□ -0.85
VPS52-217ENST00000478934 FBXL3Q9UKT7 428 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms