RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SNNO75324 88 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 GPX5O75715 221 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 LSM8O95777 96 aaKnown RBP2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 IGHG4P01861 327 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 CAPN1P07384 714 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 UQCRHP07919 91 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 GIG44P09565 113 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 LAP3P28838 519 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 P2RY2P41231 377 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 P2RY1P47900 373 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 RPL29P47914 159 aaKnown RBP2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 STX17P56962 302 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 OC90Q02509 493 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 EIF4EBP2Q13542 120 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 EXOC3L2Q2M3D2 409 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 PPP1R2P3Q6NXS1 205 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 FAM199XQ6PEV8 388 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 ARCQ7LC44 396 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 NLRP9Q7RTR0 991 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 C17orf82Q86X59 251 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 SLC38A6Q8IZM9 456 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 CADM2Q8N3J6 435 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 ATP6V0D2Q8N8Y2 350 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 TSTD1Q8NFU3 115 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 OR5L2Q8NGL0 311 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 OR1F12Q8NHA8 337 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 RNF139Q8WU17 664 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 ANKRD7Q92527 254 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 VSIG2Q96IQ7 327 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 PSKH2Q96QS6 385 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 CYP2S1Q96SQ9 504 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 KIR2DL4Q99706 377 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 GABRG3Q99928 467 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 BPIFA3Q9BQP9 254 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 NIPSNAP3BQ9BS92 247 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 BBS2Q9BXC9 721 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 LHX5Q9H2C1 402 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 POPDC2Q9HBU9 364 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 NUDT15Q9NV35 164 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 SMOXQ9NWM0 555 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 B3GNT2Q9NY97 397 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 DEC1Q9P2X7 70 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 APOBEC3BQ9UH17 382 aaKnown RBP2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 ANGPTL2Q9UKU9 493 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 FLVCR1Q9Y5Y0 555 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 DCHS1Q96JQ0 3298 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 NUP210LQ5VU65 1888 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 WDR87Q6ZQQ6 2873 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 LAMA1P25391 3075 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 DMDP11532 3685 aa2.96□□□□□ -1.94
CDC42BPA-212ENST00000478573 IGLV8-61A0A075B6I0 122 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 SYNJ2BP-COX16A0A087WUM0 186 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 CXorf51AA0A1B0GTR3 108 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 METTL21EPA6NDL7 271 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 DHRS7CA6NNS2 312 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZNF705EA8MWA4 302 aaPredicted RBP2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 E7ENQ6 273 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 F8VZ95 297 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 SGK1O00141 431 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 RIPK2O43353 540 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 KLF8O95600 359 aaPredicted RBP2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 IGLV3-19P01714 112 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 APOEP02649 317 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 OPN1MWP04001 364 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 CISD3P0C7P0 127 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZNF806P0C7X5 589 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 OPN1MW2P0DN77 364 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 OPN1MW3P0DN78 364 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 PNMTP11086 282 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 SLC2A3P11169 496 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 GABRG2P18507 467 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 MMP11P24347 488 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 KIR2DS2P43631 304 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 HNRNPA3P51991 378 aaKnown RBP2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 MYL5Q02045 173 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 C1orf61Q13536 156 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 GSG1Q2KHT4 349 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 RNF212Q495C1 297 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 OR2B11Q5JQS5 317 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 BRMS1LQ5PSV4 323 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 MARC1Q5VT66 337 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 LIPNQ5VXI9 398 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 PMF1Q6P1K2 205 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 TAC4Q86UU9 113 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 TMEM25Q86YD3 366 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 FAM71AQ8IYT1 594 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZNF679Q8IYX0 411 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 SLC34A3Q8N130 599 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 CLEC4FQ8N1N0 589 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 ALLCQ8N6M5 410 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 KIR3DL3Q8N743 410 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZNF525Q8N782 197 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 TMEM35BQ8NCS4 154 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 BTN2A3PQ96KV6 586 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 SLC35A5Q9BS91 424 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 EDEM2Q9BV94 578 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 NXF5Q9H1B4 397 aaKnown RBP2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 LINC00597Q9H2U6 94 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 RHBGQ9H310 441 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZNF385DQ9H6B1 395 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms