RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 ZNF701Q9NV72 531 aaPredicted RBP11.3□□□□□ -0.6
COL1A2-207ENST00000478215 IL20RAQ9UHF4 553 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 AURKCQ9UQB9 309 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 UGT2A1Q9Y4X1 527 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 LYVE1Q9Y5Y7 322 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 ATP23Q9Y6H3 246 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 SONP18583 2426 aaKnown RBP11.3□□□□□ -0.6
COL1A2-207ENST00000478215 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL1A2-207ENST00000478215 IGHV2OR16-5A0A0B4J2B6 119 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 UNC119BA6NIH7 251 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 ZNF14P17017 642 aaPredicted RBP11.29□□□□□ -0.6
COL1A2-207ENST00000478215 CDAP32320 146 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 RPL4P36578 427 aaKnown RBP11.29□□□□□ -0.6
COL1A2-207ENST00000478215 CDKN1AP38936 164 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 GIPRP48546 466 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 GSG1Q2KHT4 349 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 DNAL1Q4LDG9 190 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 MESTQ5EB52 335 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 Q5PR19 223 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 C11orf71Q6IPW1 123 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 FAM122BQ7Z309 247 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 TGIF2LYQ8IUE0 185 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 CCDC36Q8IYA8 594 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 DEPDC4Q8N2C3 294 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 ARIH2OSQ8N7S6 290 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 NSMAFQ92636 917 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 RASD2Q96D21 266 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 BTBD10Q9BSF8 475 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 ALG12Q9BV10 488 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 GSX2Q9BZM3 304 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 MAGIXQ9H6Y5 334 aa11.29□□□□□ -0.6
COL1A2-207ENST00000478215 STX18Q9P2W9 335 aaKnown RBP11.29□□□□□ -0.6
COL1A2-207ENST00000478215 TANC2Q9HCD6 1990 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 NAV3Q8IVL0 2385 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 A6NIZ1 184 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 IMPA2O14732 288 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 ARHGEF9O43307 516 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 OR10H3O60404 316 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 NDUFB2O95178 105 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 CRYAAP02489 173 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 OR8G3PP0DMU2 310 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 PAX1P15863 534 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 PAX7P23759 505 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 TTKP33981 857 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 ARR3P36575 388 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 GSSP48637 474 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 PTDSS1P48651 473 aaKnown RBP11.28□□□□□ -0.6
COL1A2-207ENST00000478215 FABP6P51161 128 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 ZNF84P51523 738 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 RAP1BP61224 184 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 RAB1AP62820 205 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 RAP1AP62834 184 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 HGFACQ04756 655 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 CHRNB3Q05901 458 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 TRAP1Q12931 704 aaKnown RBP11.28□□□□□ -0.6
COL1A2-207ENST00000478215 BNIP1Q12981 228 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 FAM205BPQ63HN1 556 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 PGBD2Q6P3X8 592 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 ADGRG5Q8IZF4 528 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 LRRC75A-AS1Q8N1F1 130 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 OR9Q2Q8NGE9 314 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 OR4C15Q8NGM1 316 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 NABP1Q96AH0 204 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 ZNF570Q96NI8 536 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 GPX7Q96SL4 187 aaPredicted RBP11.28□□□□□ -0.6
COL1A2-207ENST00000478215 KCNS3Q9BQ31 491 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 CADM1Q9BY67 442 aaKnown RBP11.28□□□□□ -0.6
COL1A2-207ENST00000478215 CXorf56Q9H5V9 222 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 TMCC3Q9ULS5 477 aa11.28□□□□□ -0.6
COL1A2-207ENST00000478215 TEX13CA0A0J9YWL9 993 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 TNFRSF11BO00300 401 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 NDUFS7O75251 213 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 DNAJC8O75937 253 aaPredicted RBP11.27□□□□□ -0.61
COL1A2-207ENST00000478215 KRT36O76013 467 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 UBL3O95164 117 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 FPR3P25089 353 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 ERFP50548 548 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 HMGA2P52926 109 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 ATP5J2P56134 94 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 KRR1Q13601 381 aaKnown RBP11.27□□□□□ -0.61
COL1A2-207ENST00000478215 RAB39AQ14964 217 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 FAM98BQ52LJ0 330 aaKnown RBP11.27□□□□□ -0.61
COL1A2-207ENST00000478215 THEM4Q5T1C6 240 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 OR2T5Q6IEZ7 315 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 C1orf94Q6P1W5 598 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 SMARCD3Q6STE5 483 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 PTCHD4Q6ZW05 846 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 ZNF584Q8IVC4 421 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 FBXL14Q8N1E6 418 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 MUC15Q8N387 334 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 LRRC18Q8N456 261 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 OR2T29Q8NH02 315 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 FANK1Q8TC84 345 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 CANT1Q8WVQ1 401 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 NANOS1Q8WY41 292 aaKnown RBP11.27□□□□□ -0.61
COL1A2-207ENST00000478215 LRGUKQ96M69 825 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 RBP7Q96R05 134 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 TMUB1Q9BVT8 246 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 OR52D1Q9H346 318 aa11.27□□□□□ -0.61
COL1A2-207ENST00000478215 SMURF2Q9HAU4 748 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms