RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 KLHL17Q6TDP4 642 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 TMEM108Q6UXF1 575 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 DPY19L2P2Q6ZN68 376 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 MDP1Q86V88 176 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 HS3ST5Q8IZT8 346 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 LINC00471Q8N535 108 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 PAPD5Q8NDF8 572 aaKnown RBP8.96□□□□□ -0.98
HDAC6-222ENST00000478095 MAGEE2Q8TD90 523 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-222ENST00000478095 AKAP1Q92667 903 aaKnown RBP eCLIP8.96□□□□□ -0.98
HDAC6-222ENST00000478095 NMD3Q96D46 503 aaKnown RBP8.96□□□□□ -0.98
HDAC6-222ENST00000478095 BOD1Q96IK1 185 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 ERMAPQ96PL5 475 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-222ENST00000478095 GPX7Q96SL4 187 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-222ENST00000478095 SH3GL3Q99963 347 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 NIPSNAP1Q9BPW8 284 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 TMEM204Q9BSN7 226 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 ALG12Q9BV10 488 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 IFT27Q9BW83 186 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 PLA2G12AQ9BZM1 189 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 YY1AP1Q9H869 796 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 OBP2BQ9NPH6 170 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 TMEM38BQ9NVV0 291 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 PDP1Q9P0J1 537 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-222ENST00000478095 STX18Q9P2W9 335 aaKnown RBP8.96□□□□□ -0.98
HDAC6-222ENST00000478095 MAGED1Q9Y5V3 778 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-222ENST00000478095 CDH10Q9Y6N8 788 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 IGHV1-18A0A0C4DH31 117 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 A0A1W2PPL8 197 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 CENPBD1B2RD01 187 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 CELA3BP08861 270 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 HOXB6P17509 224 aaKnown RBP8.95□□□□□ -0.98
HDAC6-222ENST00000478095 PRKACGP22612 351 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 PTAFRP25105 342 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 ZNF84P51523 738 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 IDH3GP51553 393 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-222ENST00000478095 RPS6KA3P51812 740 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 KPNB1Q14974 876 aaKnown RBP8.95□□□□□ -0.98
HDAC6-222ENST00000478095 SLC22A25Q6T423 547 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 PAMR1Q6UXH9 720 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 PTCHD4Q6ZW05 846 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 SSX8Q7RTT4 187 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 MYPOPQ86VE0 399 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-222ENST00000478095 SKA3Q8IX90 412 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 LINC00528Q8N1L1 170 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 SLC22A24Q8N4F4 322 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 OR8D4Q8NGM9 314 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 LILRB1Q8NHL6 650 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-222ENST00000478095 FGFBP3Q8TAT2 258 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 GIPC3Q8TF64 312 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 RADILQ96JH8 1075 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 FOXN4Q96NZ1 517 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 RBP7Q96R05 134 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 FEVQ99581 238 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 SYT4Q9H2B2 425 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 RERGLQ9H628 205 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 DENND2DQ9H6A0 471 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-222ENST00000478095 TBC1D23Q9NUY8 699 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 ARMC1Q9NVT9 282 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 ZNF224Q9NZL3 707 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 DNAJB9Q9UBS3 223 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 ST6GALNAC2Q9UJ37 374 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 POU2F3Q9UKI9 436 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 ITGB1BP2Q9UKP3 347 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 UGT2A1Q9Y4X1 527 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 CSMD2Q7Z408 3487 aa8.95□□□□□ -0.98
HDAC6-222ENST00000478095 SLC22A23A1A5C7 686 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 PRSS37A4D1T9 235 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 SHISA9B4DS77 424 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 ATP6V1G2-DDX39BF2Z307 99 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 FARS2O95363 451 aaKnown RBP8.94□□□□□ -0.98
HDAC6-222ENST00000478095 CECR9P0C854 216 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 OR8G3PP0DMU2 310 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 NR2C1P13056 603 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 HIST1H1CP16403 213 aaKnown RBP8.94□□□□□ -0.98
HDAC6-222ENST00000478095 CTLA4P16410 223 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 CDKN2AP42771 156 aaKnown RBP8.94□□□□□ -0.98
HDAC6-222ENST00000478095 GIPRP48546 466 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 PTDSS1P48651 473 aaKnown RBP8.94□□□□□ -0.98
HDAC6-222ENST00000478095 ZNF133P52736 654 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-222ENST00000478095 CDH11P55287 796 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 KEAP1Q14145 624 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 ETFDHQ16134 617 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 SGCAQ16586 387 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 GSG1Q2KHT4 349 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 THEM4Q5T1C6 240 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 SLC35F1Q5T1Q4 408 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 C10orf128Q5T292 105 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 OTPQ5XKR4 325 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 GPR139Q6DWJ6 353 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 SLC25A47Q6Q0C1 308 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 B3GLCTQ6Y288 498 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 RASSF6Q6ZTQ3 369 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 ZNF627Q7L945 461 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 SLC16A14Q7RTX9 510 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 JAZF1Q86VZ6 243 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 LRRC18Q8N456 261 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 OR52L1Q8NGH7 329 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 OR4K13Q8NH42 304 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 PYDC1Q8WXC3 89 aa8.94□□□□□ -0.98
HDAC6-222ENST00000478095 NANOS1Q8WY41 292 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms