RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 WSB2Q9NYS7 404 aaPredicted RBP4.48□□□□□ -1.69
SF3B6-202ENST00000478050 PTTG3PQ9NZH4 202 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 AKAP7Q9P0M2 348 aaPredicted RBP4.48□□□□□ -1.69
SF3B6-202ENST00000478050 LRIT1Q9P2V4 623 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 EPHA6Q9UF33 1036 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 GNG8Q9UK08 70 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 FBXL4Q9UKA2 621 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 MRTO4Q9UKD2 239 aaKnown RBP4.48□□□□□ -1.69
SF3B6-202ENST00000478050 FBXO4Q9UKT5 387 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 SPATA2Q9UM82 520 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 CAMK2AQ9UQM7 478 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 MMACHCQ9Y4U1 282 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 MAU2Q9Y6X3 613 aa4.48□□□□□ -1.69
SF3B6-202ENST00000478050 ADAMTS9Q9P2N4 1935 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 IGKV1D-42A0A075B6H8 117 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ARPC4-TTLL3A0A0A6YYG9 625 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 TLCD2A6NGC4 264 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 C2CD4DB7Z1M9 353 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 TMEM150CB9EJG8 249 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF561-AS1K7EIQ3 104 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 PHYHO14832 338 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF264O43296 627 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 SULT1B1O43704 296 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 SELENOFO60613 162 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF217O75362 1048 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 TPPPO94811 219 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF432O94892 652 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 TXNDC12O95881 172 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ECDO95905 644 aaPredicted RBP4.47□□□□□ -1.69
SF3B6-202ENST00000478050 PAHP00439 452 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 RENP00797 406 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 CLPSP04118 112 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 IFNA16P05015 189 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 DCNP07585 359 aaKnown RBP4.47□□□□□ -1.69
SF3B6-202ENST00000478050 CD14P08571 375 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 TACSTD2P09758 323 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 HPGDP15428 266 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ATF1P18846 271 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 STOMP27105 288 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 MAPK3P27361 379 aaPredicted RBP4.47□□□□□ -1.69
SF3B6-202ENST00000478050 RORAP35398 523 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 NAA10P41227 235 aaPredicted RBP4.47□□□□□ -1.69
SF3B6-202ENST00000478050 PPICP45877 212 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 FNTBP49356 437 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 PGDP52209 483 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 MAZP56270 477 aaKnown RBP4.47□□□□□ -1.69
SF3B6-202ENST00000478050 DCAF7P61962 342 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 RPS11P62280 158 aaKnown RBP eCLIP4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ERVK-25P63136 954 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 BTG2P78543 158 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 MRPS10P82664 201 aaKnown RBP4.47□□□□□ -1.69
SF3B6-202ENST00000478050 MAT1AQ00266 395 aaKnown RBP4.47□□□□□ -1.69
SF3B6-202ENST00000478050 RIPPLY1Q0D2K3 151 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 DYRK1AQ13627 763 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 GRM7Q14831 915 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF74Q16587 644 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 KLHL26Q53HC5 615 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 CEP78Q5JTW2 689 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 FAM69AQ5T7M9 428 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 LINC01590Q5TEZ4 76 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 FNDC7Q5VTL7 733 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 CD276Q5ZPR3 534 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 SLC22A10Q63ZE4 541 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 GPR139Q6DWJ6 353 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 LEG1Q6P5S2 330 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ASB18Q6ZVZ8 466 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF767PQ75MW2 155 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 BTN2A1Q7KYR7 527 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 SYT13Q7L8C5 426 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 SLC16A9Q7RTY1 509 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 GLCCI1Q86VQ1 547 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 SFTPA2Q8IWL1 248 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 GHDCQ8N2G8 530 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 SDR16C5Q8N3Y7 309 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ARL14Q8N4G2 192 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 TOMM5Q8N4H5 51 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 RFLNBQ8N5W9 214 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 EID2Q8N6I1 236 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 LRRC17Q8N6Y2 441 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 EXD3Q8N9H8 876 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 LRRC75AQ8NAA5 344 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 OR13C5Q8NGS8 318 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 OR5H6Q8NGV6 325 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 OR51Q1Q8NH59 317 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF671Q8TAW3 534 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 PHOSPHO1Q8TCT1 267 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 C15orf40Q8WUR7 153 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 THRSPQ92748 146 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 YIPF5Q969M3 257 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 RASD2Q96D21 266 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 MVB12AQ96EY5 273 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 MMABQ96EY8 250 aaPredicted RBP4.47□□□□□ -1.69
SF3B6-202ENST00000478050 SCMH1Q96GD3 660 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 HYLS1Q96M11 299 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 SLC46A1Q96NT5 459 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 JMJD8Q96S16 334 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ABHD1Q96SE0 405 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 NMNAT3Q96T66 252 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ELF4Q99607 663 aaPredicted RBP4.47□□□□□ -1.69
SF3B6-202ENST00000478050 MAP3K3Q99759 626 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms