RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 ADGRE4PQ86SQ3 457 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 SPEM1Q8N4L4 309 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 TXNIPQ9H3M7 391 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 ADGRL4Q9HBW9 690 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 APMAPQ9HDC9 416 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 NARSO43776 548 aaKnown RBP13.32□□□□□ -0.28
HDAC6-220ENST00000477528 HTR3BO95264 441 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 WDPCPO95876 746 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 ACHEP22303 614 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 STEAP1BQ6NZ63 245 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 IDO2Q6ZQW0 420 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 COX15Q7KZN9 410 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 ZNF679Q8IYX0 411 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 CMTM4Q8IZR5 234 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 IL22RA1Q8N6P7 574 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 CHST11Q9NPF2 352 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 VSX1Q9NZR4 365 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-220ENST00000477528 PLEKHB1Q9UF11 243 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-220ENST00000477528 SMLR1H3BR10 107 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 GPR3P46089 330 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 SSR4P51571 173 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 CLDN17P56750 224 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 IL13RA1P78552 427 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 DYRK1AQ13627 763 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 ZNF100Q8IYN0 542 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 SLC22A24Q8N4F4 322 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 DNAAF1Q8NEP3 725 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 CADM4Q8NFZ8 388 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 SLC25A43Q8WUT9 341 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-220ENST00000477528 ANKRD9Q96BM1 317 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-220ENST00000477528 BORCS8Q96FH0 119 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 GPA33Q99795 319 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 SEMA4CQ9C0C4 833 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 OR11A1Q9GZK7 315 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 WWTR1Q9GZV5 400 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 C12orf4Q9NQ89 552 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 MAN2C1Q9NTJ4 1040 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 CYR61O00622 381 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 ZNF254O75437 659 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 SERPINA5P05154 406 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 FCARP24071 287 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 LSM11P83369 360 aaKnown RBP eCLIP13.32□□□□□ -0.282e-7■■■■□ 20.9
HDAC6-220ENST00000477528 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.32□□□□□ -0.28
HDAC6-220ENST00000477528 TRAPPC6BQ86SZ2 158 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 OR1J4Q8NGS1 313 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 NECAB3Q96P71 396 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-220ENST00000477528 CLCC1Q96S66 551 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 GAREM1Q9H706 876 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 ZNF442Q9H7R0 627 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 MMP25Q9NPA2 562 aa13.32□□□□□ -0.28
HDAC6-220ENST00000477528 A0A0B4J203 849 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 H7C417 338 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 DPP4P27487 766 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 SLC25A1P53007 311 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 HSF1Q00613 529 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 DOC2BQ14184 412 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 ARTNQ5T4W7 220 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 LAIR1Q6GTX8 287 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 NUDT9Q9BW91 350 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 TSPAN10Q9H1Z9 355 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-220ENST00000477528 CASP8AP2Q9UKL3 1982 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 AKR7A3O95154 331 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 IGHA1P01876 353 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 HOXB9P17482 250 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-220ENST00000477528 CDK2P24941 298 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 STAC2Q6ZMT1 411 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 ZNF436Q9C0F3 470 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-220ENST00000477528 MRPS18AQ9NVS2 196 aaKnown RBP13.31□□□□□ -0.28
HDAC6-220ENST00000477528 KCNN3Q9UGI6 736 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 HIF3AQ9Y2N7 669 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 CNTRLQ7Z7A1 2325 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 IGHV5-51A0A0C4DH38 117 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 ICAM2P13598 275 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 TAS2R20P59543 309 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 INSL4Q14641 139 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 ST6GALNAC5Q9BVH7 336 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 ATG2BQ96BY7 2078 aa13.31□□□□□ -0.28
HDAC6-220ENST00000477528 BHLHE40O14503 412 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 GPR171O14626 319 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 IGHEP01854 428 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 HLA-AP01891 365 aaKnown RBP13.3□□□□□ -0.28
HDAC6-220ENST00000477528 GABREP78334 506 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 POU4F3Q15319 338 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 LPAL2Q16609 132 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 C3orf33Q6P1S2 294 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 CFAP77Q6ZQR2 320 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 RDH10Q8IZV5 341 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 STEAP2Q8NFT2 490 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 FGGYQ96C11 551 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 PELI1Q96FA3 418 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 OR2S2Q9NQN1 319 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 PLEKHJ1Q9NW61 149 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 ARID1BQ8NFD5 2236 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-220ENST00000477528 DOK2O60496 412 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 EIF1BO60739 113 aaKnown RBP13.3□□□□□ -0.28
HDAC6-220ENST00000477528 SPDEFO95238 335 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 NTN1O95631 604 aa13.3□□□□□ -0.28
HDAC6-220ENST00000477528 APEHP13798 732 aaKnown RBP13.3□□□□□ -0.28
HDAC6-220ENST00000477528 FKBP2P26885 142 aaKnown RBP13.3□□□□□ -0.28
HDAC6-220ENST00000477528 AKR1D1P51857 326 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms