RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ZNF837Q96EG3 531 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-205ENST00000477508 RADILQ96JH8 1075 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 CLEC4MQ9H2X3 399 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-205ENST00000477508 TBC1D23Q9NUY8 699 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 TMEM38BQ9NVV0 291 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 KIF17Q9P2E2 1029 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 IL20RAQ9UHF4 553 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 EDARQ9UNE0 448 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 PRR14LQ5THK1 2151 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 A0A096LPE4 126 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-205ENST00000477508 A0A1W2PPZ6 126 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 SOCS2O14508 198 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 RENP00797 406 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 CRABP1P29762 137 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 MRPS34P82930 218 aaKnown RBP11.48□□□□□ -0.57
TOP3A-205ENST00000477508 MESTQ5EB52 335 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 DNM1P34Q6PK57 102 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 SLC25A47Q6Q0C1 308 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 JAZF1Q86VZ6 243 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 SLC22A24Q8N4F4 322 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 OR2T33Q8NG76 320 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 TEX47Q8TBZ9 253 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 LRTOMTQ8WZ04 291 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 STMN2Q93045 179 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 PIK3IP1Q96FE7 263 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 PLPPR2Q96GM1 343 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 NIPSNAP1Q9BPW8 284 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 TSSK6Q9BXA6 273 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 TEX12Q9BXU0 123 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 KCNN2Q9H2S1 579 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 NELFAQ9H3P2 528 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 EGLN3Q9H6Z9 239 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 SIAEQ9HAT2 523 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 VSX1Q9NZR4 365 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-205ENST00000477508 ENOPH1Q9UHY7 261 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 FBXL3Q9UKT7 428 aa11.48□□□□□ -0.57
TOP3A-205ENST00000477508 H3BN98 237 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 BHLHE40O14503 412 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 UBL3O95164 117 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 IFNGP01579 166 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 CD3EP07766 207 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 OSMP13725 252 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 PRF1P14222 555 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 B4GALT1P15291 398 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 CBR1P16152 277 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 ZNF23P17027 643 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 PRKACGP22612 351 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 ARR3P36575 388 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 MYBPC1Q00872 1141 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 CLEC12AQ5QGZ9 265 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 NCMAPQ5T1S8 102 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 FAHD1Q6P587 224 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 SEZ6L2Q6UXD5 910 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 AMIGO2Q86SJ2 522 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 HS3ST5Q8IZT8 346 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 DEPDC4Q8N2C3 294 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 PARP8Q8N3A8 854 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 LNX2Q8N448 690 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 IL17RDQ8NFM7 739 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 RASD2Q96D21 266 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 WACQ9BTA9 647 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 GABARAPL1Q9H0R8 117 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 S100A14Q9HCY8 104 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 PAPOLBQ9NRJ5 636 aaKnown RBP11.47□□□□□ -0.57
TOP3A-205ENST00000477508 CRNNQ9UBG3 495 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-205ENST00000477508 KLHL21Q9UJP4 597 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 ABCA12Q86UK0 2595 aa11.47□□□□□ -0.57
TOP3A-205ENST00000477508 ITPR2Q14571 2701 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 H3BNX3 289 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 SIAH2O43255 324 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 KHDRBS3O75525 346 aaKnown RBP11.46□□□□□ -0.57
TOP3A-205ENST00000477508 SOX14O95416 240 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 SLC2A10O95528 541 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 HIST1H1CP16403 213 aaKnown RBP11.46□□□□□ -0.57
TOP3A-205ENST00000477508 CDKN2AP42771 156 aaKnown RBP11.46□□□□□ -0.57
TOP3A-205ENST00000477508 CAPZA2P47755 286 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 ZNF83P51522 516 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 FMODQ06828 376 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 GSG1Q2KHT4 349 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 SLC36A2Q495M3 483 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 SLC36A3Q495N2 470 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 FAM27BQ5VT28 67 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 SLC27A4Q6P1M0 643 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 FOXL2NBQ6ZUU3 175 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 CDC20BQ86Y33 519 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 OR8D4Q8NGM9 314 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 NSMAFQ92636 917 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 TMEM204Q9BSN7 226 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 SYT4Q9H2B2 425 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 B3GNT2Q9NY97 397 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 REV1Q9UBZ9 1251 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 RNF115Q9Y4L5 304 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 UGT2A1Q9Y4X1 527 aa11.46□□□□□ -0.57
TOP3A-205ENST00000477508 NOTCH2Q04721 2471 aa11.46□□□□□ -0.58
TOP3A-205ENST00000477508 APCP25054 2843 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 HEATR1Q9H583 2144 aaKnown RBP11.45□□□□□ -0.58
TOP3A-205ENST00000477508 A0A1W2PR80 420 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 DPRXA6NFQ7 191 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 H7C1C5 153 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms