RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 C1orf198Q9H425 327 aa5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 RAD21L1Q9H4I0 556 aa5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 ZMAT3Q9HA38 289 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 CCNB1IP1Q9NPC3 277 aa5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 TMEM38BQ9NVV0 291 aa5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 MRPL39Q9NYK5 338 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 GLTPQ9NZD2 209 aa5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 EIF3KQ9UBQ5 218 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 TESQ9UGI8 421 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 OPN4Q9UHM6 478 aa5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 PURGQ9UJV8 347 aaKnown RBP5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 TRIM33Q9UPN9 1127 aa5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 GPR45Q9Y5Y3 372 aa5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 AUP1Q9Y679 476 aa5.67□□□□□ -1.5
RTFDC1-206ENST00000477485 IGLV3-9A0A075B6K5 115 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 LOC102725191A0A1B0GVB3 256 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 C5orf49A4QMS7 147 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 TRPC5OSA6NMA1 111 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 CPSF4LA6NMK7 179 aaKnown RBP5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 CLIC1O00299 241 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 DHHO43323 396 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 TIMM8AO60220 97 aaPredicted RBP5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 CH25HO95992 272 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 IGHV1-46P01743 117 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 CRYBA1P05813 215 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 QDPRP09417 244 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 MDKP21741 143 aaPredicted RBP5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 RBMXP38159 391 aaKnown RBP5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 MPV17P39210 176 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 POLR2JP52435 117 aaKnown RBP5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 CDH12P55289 794 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 TNFAIP6P98066 277 aaPredicted RBP5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 BST1Q10588 318 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 RGNQ15493 299 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF718Q3SXZ3 478 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 THEM4Q5T1C6 240 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 GCNT6Q5T4J0 391 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 HHATQ5VTY9 493 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 BRICD5Q6PL45 260 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC2A7Q6PXP3 512 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 WDR88Q6ZMY6 472 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 DOK3Q7L591 496 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 NANOGNBQ7Z5D8 188 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 PXKQ7Z7A4 578 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 COMTD1Q86VU5 262 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 KLHL36Q8N4N3 616 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 GOLGA6L1Q8N7Z2 621 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 LSMEM1Q8N8F7 131 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 EIF1ADQ8N9N8 165 aaKnown RBP5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 SYT14Q8NB59 555 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 OR9I1Q8NGQ6 314 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 ABHD4Q8TB40 342 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC25A40Q8TBP6 338 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 DVL3Q92997 716 aaPredicted RBP5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 TMEM54Q969K7 222 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 UBE2FQ969M7 185 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC35B4Q969S0 331 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC41A3Q96GZ6 507 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF607Q96SK3 696 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 ROPN1BQ9BZX4 212 aaPredicted RBP5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 ROPN1Q9HAT0 212 aaPredicted RBP5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 MSL2Q9HCI7 577 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 A4GALTQ9NPC4 353 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 MMP26Q9NRE1 261 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 NKIRAS2Q9NYR9 191 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 PLEK2Q9NYT0 353 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 OR5V1Q9UGF6 321 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 LEF1Q9UJU2 399 aaPredicted RBP5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 ANGPT4Q9Y264 503 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 NPTNQ9Y639 398 aa5.66□□□□□ -1.5
RTFDC1-206ENST00000477485 TRAV40A0A0B4J280 105 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 A0A0B4J2E0 115 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 MDFIC2A0A1B0GVS7 189 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 A0A1B0GX12 115 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 PRORSD1PA6NEY8 169 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 ZSCAN5BA6NJL1 495 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 POM121CA8CG34 1229 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 BLOC1S5-TXNDC5H3BN57 136 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 M0R3H8 397 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 UBDO15205 165 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 TM9SF1O15321 606 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 HDAC3O15379 428 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 TPST1O60507 370 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 TGDSO95455 350 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 SNAP29O95721 258 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 MT-ATP6P00846 226 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 KNG1P01042 644 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 FSHBP01225 129 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 IGHV3-13P01766 116 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 IGHG1P01857 330 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 IGHMP01871 453 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 RNASE1P07998 156 aaKnown RBP5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 ZCCHC18P0CG32 403 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 ETS2P15036 469 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC6A2P23975 617 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 STOMP27105 288 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 MTNR1AP48039 350 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 GDI2P50395 445 aaKnown RBP5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 SEC61A1P61619 476 aaKnown RBP5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 CDK6Q00534 326 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms