RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 DAG1Q14118 895 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 LRRC36Q1X8D7 754 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 PGGHGQ32M88 737 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 ZIK1Q3SY52 487 aaPredicted RBP13.9□□□□□ -0.18
COPS3-207ENST00000477299 TBRG1Q3YBR2 411 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 WFDC8Q8IUA0 241 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 ZNF295-AS1Q8N0V1 137 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 NPEPL1Q8NDH3 523 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 STEAP2Q8NFT2 490 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 TEX47Q8TBZ9 253 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 SPOCK3Q9BQ16 436 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 ALG12Q9BV10 488 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 HDHD5Q9BXW7 423 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 NUAK2Q9H093 628 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 MED20Q9H944 212 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 NOX3Q9HBY0 568 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 SRA1Q9HD15 236 aaKnown RBP13.9□□□□□ -0.18
COPS3-207ENST00000477299 B3GAT2Q9NPZ5 323 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 SLC17A5Q9NRA2 495 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 ZNF224Q9NZL3 707 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 NPAP1Q9NZP6 1156 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 VSX1Q9NZR4 365 aaPredicted RBP13.9□□□□□ -0.18
COPS3-207ENST00000477299 POFUT2Q9Y2G5 429 aa13.9□□□□□ -0.18
COPS3-207ENST00000477299 ABCA4P78363 2273 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 ANKHD1Q8IWZ3 2542 aaKnown RBP13.89□□□□□ -0.19
COPS3-207ENST00000477299 OR5H1A6NKK0 313 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 ZNF99A8MXY4 864 aaPredicted RBP13.89□□□□□ -0.19
COPS3-207ENST00000477299 M0R129 80 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 XKRYO14609 159 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 MPZL1O95297 269 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 IGFBP5P24593 272 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 NOS3P29474 1203 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 CRMP1Q14194 572 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 PTGES3Q15185 160 aaKnown RBP13.89□□□□□ -0.19
COPS3-207ENST00000477299 C10orf128Q5T292 105 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 RPL13AP3Q6NVV1 102 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 SKA3Q8IX90 412 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 SLC37A3Q8NCC5 494 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 OR2T33Q8NG76 320 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 RBP7Q96R05 134 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 SH3GL3Q99963 347 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 MED18Q9BUE0 208 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 HCAR1Q9BXC0 346 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 NDEL1Q9GZM8 345 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 TMEM38BQ9NVV0 291 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 SLC25A15Q9Y619 301 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 CRYBG3Q68DQ2 2970 aa13.89□□□□□ -0.19
COPS3-207ENST00000477299 FAM183AA6NL82 134 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 CENPBD1B2RD01 187 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 IDH3BO43837 385 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 SLC16A7O60669 478 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 CLUP10909 449 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 EPXP11678 715 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 COX6B1P14854 86 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 PEX2P28328 305 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 PYCR1P32322 319 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 THEM4Q5T1C6 240 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 FAM205BPQ63HN1 556 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 ANKRD16Q6P6B7 361 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 UGT2A3Q6UWM9 527 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 ZNF813Q6ZN06 617 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 ZBTB49Q6ZSB9 765 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 HDDC2Q7Z4H3 204 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 ABHD12BQ7Z5M8 362 aaPredicted RBP13.88□□□□□ -0.19
COPS3-207ENST00000477299 OR6V1Q8N148 313 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 PARP8Q8N3A8 854 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 OR51L1Q8NGJ5 315 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 OR9Q1Q8NGQ5 310 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 NABP1Q96AH0 204 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 FOXB1Q99853 325 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 RBM4BQ9BQ04 359 aaKnown RBP13.88□□□□□ -0.19
COPS3-207ENST00000477299 RBM4Q9BWF3 364 aaKnown RBP13.88□□□□□ -0.19
COPS3-207ENST00000477299 RIBC2Q9H4K1 309 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 SEC61A2Q9H9S3 476 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 RPRD1BQ9NQG5 326 aaKnown RBP13.88□□□□□ -0.19
COPS3-207ENST00000477299 USE1Q9NZ43 259 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 B9D1Q9UPM9 204 aa13.88□□□□□ -0.19
COPS3-207ENST00000477299 COA3Q9Y2R0 106 aaPredicted RBP13.88□□□□□ -0.19
COPS3-207ENST00000477299 A0A1W2PPL8 197 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 CYSRT1A8MQ03 144 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 DLGAP1O14490 977 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 HLA-HP01893 362 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 GYPBP06028 91 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 LOXP28300 417 aaPredicted RBP13.87□□□□□ -0.19
COPS3-207ENST00000477299 GRK5P34947 590 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 ALDH3A2P51648 485 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 PIGFQ07326 219 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 NPRL3Q12980 569 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 TRIP10Q15642 601 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 SGCAQ16586 387 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 TIMM23BQ5SRD1 257 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 OR7E24Q6IFN5 339 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 SLC27A4Q6P1M0 643 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 LYPD4Q6UWN0 246 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 MYPOPQ86VE0 399 aaPredicted RBP13.87□□□□□ -0.19
COPS3-207ENST00000477299 JAZF1Q86VZ6 243 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 LRRC18Q8N456 261 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 GALNT4Q8N4A0 578 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 SLC22A24Q8N4F4 322 aa13.87□□□□□ -0.19
COPS3-207ENST00000477299 NRG4Q8WWG1 115 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms