RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 DCAF13Q9NV06 445 aaKnown RBP3.79□□□□□ -1.8
CD55-208ENST00000476590 ZNF701Q9NV72 531 aaPredicted RBP3.79□□□□□ -1.8
CD55-208ENST00000476590 HIF1ANQ9NWT6 349 aa3.79□□□□□ -1.8
CD55-208ENST00000476590 AURKAIP1Q9NWT8 199 aaPredicted RBP3.79□□□□□ -1.8
CD55-208ENST00000476590 MARCH5Q9NX47 278 aa3.79□□□□□ -1.8
CD55-208ENST00000476590 TAS2R16Q9NYV7 291 aa3.79□□□□□ -1.8
CD55-208ENST00000476590 PPP1R3CQ9UQK1 317 aa3.79□□□□□ -1.8
CD55-208ENST00000476590 ASF1AQ9Y294 204 aa3.79□□□□□ -1.8
CD55-208ENST00000476590 OR51B4Q9Y5P0 310 aa3.79□□□□□ -1.8
CD55-208ENST00000476590 UBIAD1Q9Y5Z9 338 aa3.79□□□□□ -1.8
CD55-208ENST00000476590 ZSWIM8A7E2V4 1837 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 TRAV30A0A087WSZ9 112 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 IGHV2-70DA0A0C4DH43 119 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 UBE2QL1A1L167 161 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 ELOVL7A1L3X0 281 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 ASPDHA6ND91 283 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 NAP1L6A6NFF2 107 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 GJE1A6NN92 205 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 NFKBIEO00221 500 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 SYT7O43581 403 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 MFSD11O43934 449 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 MPZL2O60487 215 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 SCGNO76038 276 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 VNN2O95498 520 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 HPRT1P00492 218 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 TFPIP10646 304 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 ELK1P19419 428 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 TACR2P21452 398 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 ANOS1P23352 680 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 ITPKBP27987 946 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 FGF9P31371 208 aaPredicted RBP3.78□□□□□ -1.8
CD55-208ENST00000476590 TAF6P49848 677 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 SULT1A1P50225 295 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 TNFSF10P50591 281 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 CCR8P51685 355 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 VAMP7P51809 220 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 CRYBA4P53673 196 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 CLDN12P56749 244 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 PCBP4P57723 403 aaKnown RBP3.78□□□□□ -1.8
CD55-208ENST00000476590 RPS16P62249 146 aaKnown RBP3.78□□□□□ -1.8
CD55-208ENST00000476590 EFNB1P98172 346 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 PAX5Q02548 391 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 TGM3Q08188 693 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 PPIGQ13427 754 aaKnown RBP eCLIP3.78□□□□□ -1.8
CD55-208ENST00000476590 TSTA3Q13630 321 aaPredicted RBP3.78□□□□□ -1.8
CD55-208ENST00000476590 PLK5Q496M5 336 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 UNC50Q53HI1 259 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 OR2T2Q6IF00 324 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 APOBEC3HQ6NTF7 200 aaKnown RBP3.78□□□□□ -1.8
CD55-208ENST00000476590 LINGO4Q6UY18 593 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 MED25Q71SY5 747 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 SPATA19Q7Z5L4 167 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 TMEM144Q7Z5S9 345 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 ZDHHC21Q8IVQ6 265 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 MRPL43Q8N983 215 aaKnown RBP3.78□□□□□ -1.8
CD55-208ENST00000476590 TMEM161BQ8NDZ6 487 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 OR4F15Q8NGB8 312 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 OR4E2Q8NGC2 313 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 OR5M3Q8NGP4 307 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 OR1J1Q8NGS3 322 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 RHBDD1Q8TEB9 315 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 CASTOR1Q8WTX7 329 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 NUDCD2Q8WVJ2 157 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 THAP4Q8WY91 577 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 RGMAQ96B86 450 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 SPSB1Q96BD6 273 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 PYURFQ96I23 114 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 YPEL4Q96NS1 127 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 SYT3Q9BQG1 590 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 TMEM47Q9BQJ4 181 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 C1orf43Q9BWL3 253 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 ZNF471Q9BX82 626 aaPredicted RBP3.78□□□□□ -1.8
CD55-208ENST00000476590 ULBP1Q9BZM6 244 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 RGCCQ9H4X1 137 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 POMKQ9H5K3 350 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 TMEM185BQ9H7F4 350 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 METTL7AQ9H8H3 244 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 RHOFQ9HBH0 211 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 P4HTMQ9NXG6 502 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 ZNF226Q9NYT6 803 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 TAS2R5Q9NYW4 299 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 SPG21Q9NZD8 308 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 B3GAT1Q9P2W7 334 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 FLVCR2Q9UPI3 526 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 HS3ST4Q9Y661 456 aa3.78□□□□□ -1.8
CD55-208ENST00000476590 CLEC18AA5D8T8 446 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 TMEM235A6NFC5 223 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 DHRS7CA6NNS2 312 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 PROB1E7EW31 1015 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 M0R036 132 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 OVOL3O00110 214 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 CTSVO60911 334 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 GRAP2O75791 330 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 MMP23AO75900 390 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 KCNK5O95279 499 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 OR2C1O95371 312 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 AIFM1O95831 613 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 EFEMP2O95967 443 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 CST4P01036 141 aa3.78□□□□□ -1.81
CD55-208ENST00000476590 TGFB1P01137 390 aa3.78□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms