RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ENPP6Q6UWR7 440 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 ZNF621Q6ZSS3 439 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 COPS6Q7L5N1 327 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 TRIM69Q86WT6 500 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 CCDC54Q8NEL0 328 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 NPBQ8NG41 125 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 FAM110BQ8TC76 370 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.13□□□□□ -1.91
PTCD3-211ENST00000476215 SLC41A3Q96GZ6 507 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 FAM210BQ96KR6 192 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 ZNF641Q96N77 438 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-211ENST00000476215 PSKH2Q96QS6 385 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 PELOQ9BRX2 385 aaKnown RBP3.13□□□□□ -1.91
PTCD3-211ENST00000476215 CRACR2AQ9BSW2 395 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 RIOK2Q9BVS4 552 aaKnown RBP3.13□□□□□ -1.91
PTCD3-211ENST00000476215 DEFB127Q9H1M4 99 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 RANBP3Q9H6Z4 567 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-211ENST00000476215 ADAMTS7Q9UKP4 1686 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 MAP3K15Q6ZN16 1313 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 FANCIQ9NVI1 1328 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 MAPK8IP3Q9UPT6 1336 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 KIAA1551Q9HCM1 1747 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 MTCL1Q9Y4B5 1905 aaKnown RBP3.13□□□□□ -1.91
PTCD3-211ENST00000476215 IGHV3-64DA0A0J9YX35 117 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 CCDC182A6NF36 153 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 GOLGA8SH3BPF8 625 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 TMX2-CTNND1H3BSU7 103 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 LAD1O00515 517 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 TIMM8AO60220 97 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-211ENST00000476215 IL1BP01584 269 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 IGKV3-11P04433 115 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 TDGF1P13385 188 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 OPRD1P41143 372 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 SSR1P43307 286 aaKnown RBP3.12□□□□□ -1.91
PTCD3-211ENST00000476215 TDGF1P3P51864 188 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 RFX4Q33E94 735 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 RGS9BPQ6ZS82 235 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 C6orf120Q7Z4R8 191 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 TBC1D21Q8IYX1 336 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 LRRC75A-AS1Q8N1F1 130 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 ARL6IP6Q8N6S5 226 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 FAM83FQ8NEG4 500 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-211ENST00000476215 OR10G9Q8NGN4 311 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 PYROXD1Q8WU10 500 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 ZFP14Q9HCL3 533 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 RAB26Q9ULW5 256 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 HEBP2Q9Y5Z4 205 aa3.12□□□□□ -1.91
PTCD3-211ENST00000476215 AFDNP55196 1824 aaKnown RBP3.12□□□□□ -1.91
PTCD3-211ENST00000476215 SBF1O95248 1867 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 NRXN2Q9P2S2 1712 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 UBR2Q8IWV8 1755 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 A0A1B0GVL5 298 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 ICOSLGO75144 302 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 ALDOBP05062 364 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 CAPN1P07384 714 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 CEBPDP49716 269 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-211ENST00000476215 PPOXP50336 477 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 ACTR1AP61163 376 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 ERVK-25P63136 954 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 REG3AQ06141 175 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 SCRN3Q0VDG4 424 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 WDR43Q15061 677 aaKnown RBP eCLIP3.11□□□□□ -1.91
PTCD3-211ENST00000476215 HSP90AB3PQ58FF7 597 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 CASC1Q6TDU7 716 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 CAMK2N1Q7Z7J9 78 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 THOC6Q86W42 341 aaKnown RBP3.11□□□□□ -1.91
PTCD3-211ENST00000476215 OR4F15Q8NGB8 312 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 OR1N2Q8NGR9 330 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 DTX3LQ8TDB6 740 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 TRIM62Q9BVG3 475 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 PPA2Q9H2U2 334 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 AZI2Q9H6S1 392 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 LY9Q9HBG7 655 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 HYPKQ9NX55 129 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 CALYQ9NYX4 217 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 STOX2Q9P2F5 926 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-211ENST00000476215 TRMT112Q9UI30 125 aaKnown RBP3.11□□□□□ -1.91
PTCD3-211ENST00000476215 TMCC3Q9ULS5 477 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 PIGLQ9Y2B2 252 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 SLX4Q8IY92 1834 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 ARFGEF1Q9Y6D6 1849 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 UBN2Q6ZU65 1347 aa3.11□□□□□ -1.91
PTCD3-211ENST00000476215 SIPA1L3O60292 1781 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-211ENST00000476215 BRCA1P38398 1863 aaKnown RBP3.1□□□□□ -1.91
PTCD3-211ENST00000476215 SNTNA6NMZ2 147 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 MAGEB4O15481 346 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-211ENST00000476215 RIPK2O43353 540 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 PRB2P02812 416 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-211ENST00000476215 ADRB3P13945 408 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 SLC2A5P22732 501 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 EPS15P42566 896 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 NMUP48645 174 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 SUCLG1P53597 346 aaKnown RBP3.1□□□□□ -1.91
PTCD3-211ENST00000476215 OGDHQ02218 1023 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 GGTLC2Q14390 218 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 GNMTQ14749 295 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 PIGGQ5H8A4 983 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 OR2A2Q6IF42 318 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 LCN12Q6JVE5 192 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms