RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 C10orf128Q5T292 105 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 KRT80Q6KB66 452 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 TMPRSS11FQ6ZWK6 438 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 CLDN22Q8N7P3 220 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 TSPAN32Q96QS1 320 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 REG4Q9BYZ8 158 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 DENND2DQ9H6A0 471 aaPredicted RBP18.3■□□□□ 0.52
LIME1-204ENST00000476183 ZNF442Q9H7R0 627 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 MAGEL2Q9UJ55 1249 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 UGT2A1Q9Y4X1 527 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 PMF1-BGLAPU3KQ54 211 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 ABCA1O95477 2261 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 HIVEP2P31629 2446 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 TRBV4-1A0A0J9YWV2 114 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 FAM171A2A8MVW0 826 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 B9A039 149 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 ARPC2O15144 300 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 LY6HO94772 140 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 HOXB4P17483 251 aaPredicted RBP18.29■□□□□ 0.52
LIME1-204ENST00000476183 NR4A1P22736 598 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 SLC9A3P48764 834 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 RPL27P61353 136 aaKnown RBP18.29■□□□□ 0.52
LIME1-204ENST00000476183 SNTB2Q13425 540 aaKnown RBP18.29■□□□□ 0.52
LIME1-204ENST00000476183 DAG1Q14118 895 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 SEC23BQ15437 767 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 TAF11Q15544 211 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 EFNB3Q15768 340 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 MSMPQ1L6U9 139 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 C16orf89Q6UX73 402 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 ZNF519Q8TB69 540 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 PYURFQ96I23 114 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 DHRS1Q96LJ7 313 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 PLK3Q9H4B4 646 aa18.29■□□□□ 0.52
LIME1-204ENST00000476183 STX18Q9P2W9 335 aaKnown RBP18.29■□□□□ 0.52
LIME1-204ENST00000476183 FAM32AQ9Y421 112 aaKnown RBP18.29■□□□□ 0.52
LIME1-204ENST00000476183 IGHV4-30-2A0A087WSY4 118 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 TMEM129A0AVI4 362 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 FARS2O95363 451 aaKnown RBP18.28■□□□□ 0.52
LIME1-204ENST00000476183 FAM107AO95990 144 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 BMP4P12644 408 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 CDAP32320 146 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 ZNF84P51523 738 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 SNRPD2P62316 118 aaKnown RBP18.28■□□□□ 0.52
LIME1-204ENST00000476183 MXRA7P84157 204 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 KRTAP1-1Q07627 177 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 ANKDD1AQ495B1 522 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 NRN1LQ496H8 165 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 FGD3Q5JSP0 725 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 SLC25A47Q6Q0C1 308 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 CDK20Q8IZL9 346 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 ZNF525Q8N782 197 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 OR10H5Q8NGA6 315 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 FAM46AQ96IP4 442 aaKnown RBP18.28■□□□□ 0.52
LIME1-204ENST00000476183 NSMCE2Q96MF7 247 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 SORCS2Q96PQ0 1159 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 FUZQ9BT04 418 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 ALG12Q9BV10 488 aa18.28■□□□□ 0.52
LIME1-204ENST00000476183 SONP18583 2426 aaKnown RBP18.28■□□□□ 0.52
LIME1-204ENST00000476183 GPRIN2O60269 458 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 SERPINA5P05154 406 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 NPR2P20594 1047 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 OMPP47874 163 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 LIMS1P48059 325 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 EFNA4P52798 201 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 ERVK-25P63136 954 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 CD47Q08722 323 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 ZBED5Q49AG3 693 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 GKAP1Q5VSY0 366 aaPredicted RBP18.27■□□□□ 0.52
LIME1-204ENST00000476183 RRM2BQ7LG56 351 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 SLC16A14Q7RTX9 510 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 OR52J3Q8NH60 311 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 NSMAFQ92636 917 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 NABP1Q96AH0 204 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 POM121Q96HA1 1249 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 SMURF2Q9HAU4 748 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 NDE1Q9NXR1 346 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 FAM53CQ9NYF3 392 aa18.27■□□□□ 0.52
LIME1-204ENST00000476183 B2RBV5 119 aa18.26■□□□□ 0.51
LIME1-204ENST00000476183 ENTPD5O75356 428 aa18.26■□□□□ 0.51
LIME1-204ENST00000476183 PTP4A3O75365 173 aa18.26■□□□□ 0.51
LIME1-204ENST00000476183 MMP7P09237 267 aaPredicted RBP18.26■□□□□ 0.51
LIME1-204ENST00000476183 MRPS34P82930 218 aaKnown RBP18.26■□□□□ 0.51
LIME1-204ENST00000476183 SVOPLQ8N434 492 aa18.26■□□□□ 0.51
LIME1-204ENST00000476183 LRRC18Q8N456 261 aa18.26■□□□□ 0.51
LIME1-204ENST00000476183 CCDC197Q8NCU1 140 aa18.26■□□□□ 0.51
LIME1-204ENST00000476183 NSL1Q96IY1 281 aa18.26■□□□□ 0.51
LIME1-204ENST00000476183 DOK1Q99704 481 aa18.26■□□□□ 0.51
LIME1-204ENST00000476183 RHNO1Q9BSD3 238 aa18.26■□□□□ 0.51
LIME1-204ENST00000476183 FBXL3Q9UKT7 428 aa18.26■□□□□ 0.51
LIME1-204ENST00000476183 TMEM5Q9Y2B1 443 aa18.26■□□□□ 0.51
LIME1-204ENST00000476183 ADAM18Q9Y3Q7 739 aa18.26■□□□□ 0.51
LIME1-204ENST00000476183 A0A096LNT2 108 aa18.25■□□□□ 0.51
LIME1-204ENST00000476183 H7C1C5 153 aa18.25■□□□□ 0.51
LIME1-204ENST00000476183 F12P00748 615 aaPredicted RBP18.25■□□□□ 0.51
LIME1-204ENST00000476183 LCN6P62502 163 aa18.25■□□□□ 0.51
LIME1-204ENST00000476183 SLC36A2Q495M3 483 aa18.25■□□□□ 0.51
LIME1-204ENST00000476183 SPATS1Q496A3 300 aa18.25■□□□□ 0.51
LIME1-204ENST00000476183 FAM205BPQ63HN1 556 aa18.25■□□□□ 0.51
LIME1-204ENST00000476183 TMEM53Q6P2H8 277 aa18.25■□□□□ 0.51
LIME1-204ENST00000476183 CLEC2AQ6UVW9 174 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms