RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ATP7AQ04656 1500 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 CDHR2Q9BYE9 1310 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 HECW2Q9P2P5 1572 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 MADDQ8WXG6 1647 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 TNRQ92752 1358 aa3.37□□□□□ -1.87
VPS13D-207ENST00000476169 GLYATL1P3A0A0U1RQE8 302 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 A0A1W2PRF3 423 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 A0A1W2PRM7 423 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 MGAT4DA6NG13 374 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 USP27XA6NNY8 438 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 ZNF705EA8MWA4 302 aaPredicted RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 E7EWF7 191 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 MGRN1O60291 552 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 GMDSO60547 372 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 SNAP91O60641 907 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 MPDU1O75352 247 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 CRTAPO75718 401 aaPredicted RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 KLHL2O95198 593 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 SLC2A10O95528 541 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 LSM8O95777 96 aaKnown RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 RPN2P04844 631 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 ZSCAN5DPP0CG00 497 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 CT45A10P0DMU9 189 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 CD40LGP29965 261 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 OR1E1P30953 314 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 RFC3P40938 356 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 NBL1P41271 181 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 KCNJ3P48549 501 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 BLVRAP53004 296 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 UBE2KP61086 200 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 STXBP1P61764 594 aaKnown RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 SERTAD2Q14140 314 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 PAN3Q58A45 887 aaKnown RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 TPRG1LQ5T0D9 272 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 AP1ARQ63HQ0 302 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 TIGD3Q6B0B8 471 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 ZNF470Q6ECI4 717 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 PRMT9Q6P2P2 845 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 GDPD3Q7L5L3 318 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 TIPARPQ7Z3E1 657 aaKnown RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 PLCZ1Q86YW0 608 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 PUSL1Q8N0Z8 303 aaKnown RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 PRELID2Q8N945 189 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 OR4Q3Q8NH05 313 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 FLVCR1-AS1Q8TAF5 88 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 ACER1Q8TDN7 264 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 TFB1MQ8WVM0 346 aaKnown RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 TFGQ92734 400 aaPredicted RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 SMARCD2Q92925 531 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 PGLYRP4Q96LB8 373 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 ZNF597Q96LX8 424 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 NOL4LQ96MY1 436 aaPredicted RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 RARRES2Q99969 163 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 KCTD14Q9BQ13 255 aaPredicted RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 UTP23Q9BRU9 249 aaKnown RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 FAIM2Q9BWQ8 316 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 OSBPL10Q9BXB5 764 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 MAP1LC3CQ9BXW4 147 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 HDHD2Q9H0R4 259 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 DEFB129Q9H1M3 183 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 CWH43Q9H720 699 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 KIR3DX1Q9H7L2 352 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 SIAEQ9HAT2 523 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 FGF22Q9HCT0 170 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 THAP10Q9P2Z0 257 aaPredicted RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 UBQLN1Q9UMX0 589 aaKnown RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 SLC22A14Q9Y267 594 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 RCL1Q9Y2P8 373 aaKnown RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 PREX2Q70Z35 1606 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 ADAMTSL3P82987 1691 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 ANKRD30AQ9BXX3 1397 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 LRRIQ1Q96JM4 1722 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 NPATQ14207 1427 aa3.36□□□□□ -1.87
VPS13D-207ENST00000476169 RRBP1Q9P2E9 1410 aaKnown RBP3.36□□□□□ -1.87
VPS13D-207ENST00000476169 TSPOAP1O95153 1857 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 PLXNC1O60486 1568 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 MYH15Q9Y2K3 1946 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 IGLV3-22A0A075B6J6 115 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 IGLV4-3A0A075B6K6 122 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 TSPAN11A1L157 253 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 RBMY1BA6NDE4 496 aaKnown RBP3.35□□□□□ -1.87
VPS13D-207ENST00000476169 RBMY1EA6NEQ0 496 aaKnown RBP3.35□□□□□ -1.87
VPS13D-207ENST00000476169 DHRS7CA6NNS2 312 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 MPTX1A8MV57 137 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 F6UB75 175 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 CLDN11O75508 207 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 CBR3O75828 277 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 RENP00797 406 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 IGHV2-5P01817 119 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 HBE1P02100 147 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 KLK1P06870 262 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 DCNP07585 359 aaKnown RBP3.35□□□□□ -1.87
VPS13D-207ENST00000476169 RBMY1DP0C7P1 496 aaKnown RBP3.35□□□□□ -1.87
VPS13D-207ENST00000476169 RBMY1A1P0DJD3 496 aaKnown RBP3.35□□□□□ -1.87
VPS13D-207ENST00000476169 CTRB1P17538 263 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 TCN1P20061 433 aaPredicted RBP3.35□□□□□ -1.87
VPS13D-207ENST00000476169 SYT1P21579 422 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 LMO2P25791 158 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 UGT1A3P35503 534 aa3.35□□□□□ -1.87
VPS13D-207ENST00000476169 UGT2B10P36537 528 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms