RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 C4orf36Q96KX1 117 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 TSC22D3Q99576 134 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 TIMP4Q99727 224 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 TTTY10Q9BZA0 68 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 LDAHQ9H6V9 325 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 ISG20L2Q9H9L3 353 aaKnown RBP12.23□□□□□ -0.45
TRAF4-210ENST00000475329 PAQR5Q9NXK6 330 aaPredicted RBP12.23□□□□□ -0.45
TRAF4-210ENST00000475329 BABAM2Q9NXR7 383 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 COPS3Q9UNS2 423 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 COA3Q9Y2R0 106 aaPredicted RBP12.23□□□□□ -0.45
TRAF4-210ENST00000475329 LIPGQ9Y5X9 500 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 TMEM14AQ9Y6G1 99 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 DNAJC13O75165 2243 aa12.23□□□□□ -0.45
TRAF4-210ENST00000475329 CACNA1AO00555 2505 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 A0A1W2PPW3 197 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 CYTIPO60759 359 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 SYNGR4O95473 234 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 GPANK1O95872 356 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 LALBAP00709 142 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 ITGB2P05107 769 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 PCSK6P29122 969 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 PTGS2P35354 604 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 ENTPD1P49961 510 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 SH3BGRP55822 239 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-210ENST00000475329 LSM3P62310 102 aaKnown RBP12.22□□□□□ -0.45
TRAF4-210ENST00000475329 SRYQ05066 204 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 NFATC3Q12968 1075 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 ZNF169Q14929 603 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-210ENST00000475329 SPCS2Q15005 226 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 ETFDHQ16134 617 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 TP53I3Q53FA7 332 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 RNFT1Q5M7Z0 435 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 CARD17Q5XLA6 110 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 FCRLAQ7L513 359 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 VASH1Q7L8A9 365 aaPredicted RBP12.22□□□□□ -0.45
TRAF4-210ENST00000475329 SLC26A10Q8NG04 563 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 ROBO4Q8WZ75 1007 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 FOXN4Q96NZ1 517 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 DCBLD2Q96PD2 775 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 OR2M2Q96R28 347 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 CHCHD6Q9BRQ6 235 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 DCUN1D5Q9BTE7 237 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 DEFB127Q9H1M4 99 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 OR51E2Q9H255 320 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 MRPL22Q9NWU5 206 aaKnown RBP12.22□□□□□ -0.45
TRAF4-210ENST00000475329 KLHL9Q9P2J3 617 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 LAMP5Q9UJQ1 280 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 ZMIZ1Q9ULJ6 1067 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 STUB1Q9UNE7 303 aa12.22□□□□□ -0.45
TRAF4-210ENST00000475329 LOC100506127A0A0U1RQW1 187 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 PNMA8CA0A1B0GUJ8 204 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 ZNF716A6NP11 495 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 MKRN2OSH3BPM6 223 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 SPARCP09486 303 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 GAAP10253 952 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 ZNF823P16415 610 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 PSMA1P25786 263 aaKnown RBP12.21□□□□□ -0.45
TRAF4-210ENST00000475329 CSNK1A1P48729 337 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 GBX2P52951 348 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-210ENST00000475329 OR12D2P58182 307 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 VBP1P61758 197 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 NCS1P62166 190 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 ADAM8P78325 824 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 GPR50Q13585 617 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 HIST3H3Q16695 136 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 GDPGP1Q6ZNW5 385 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 PLEKHG7Q6ZR37 379 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 DPY19L4Q7Z388 723 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 FAM220AQ7Z4H9 259 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-210ENST00000475329 GLB1L2Q8IW92 636 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 ZFP41Q8N8Y5 198 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 ZNF454Q8N9F8 522 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 KBTBD8Q8NFY9 601 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 OR6N1Q8NGY5 312 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 OTOSQ8NHW6 89 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 NSMAFQ92636 917 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 ZNF845Q96IR2 970 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-210ENST00000475329 ZNF385AQ96PM9 386 aaKnown RBP12.21□□□□□ -0.45
TRAF4-210ENST00000475329 GNG8Q9UK08 70 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 RCE1Q9Y256 329 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 KLHDC2Q9Y2U9 406 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 FLVCR1Q9Y5Y0 555 aa12.21□□□□□ -0.45
TRAF4-210ENST00000475329 IGKV1D-43A0A0B4J1Z2 117 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 A0A1W2PPL8 197 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 K7ENP7 123 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 ZNF593O00488 134 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-210ENST00000475329 IGHG3P01860 377 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 HRGP04196 525 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 CELP19835 753 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 GABRA5P31644 462 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 RPS25P62851 125 aaKnown RBP12.2□□□□□ -0.46
TRAF4-210ENST00000475329 RASGEF1BQ0VAM2 473 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 SLC18B1Q6NT16 456 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 INO80CQ6PI98 192 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-210ENST00000475329 SLC25A47Q6Q0C1 308 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 USP43Q70EL4 1123 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 CHMP1BQ7LBR1 199 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 KCTD20Q7Z5Y7 419 aa12.2□□□□□ -0.46
TRAF4-210ENST00000475329 EGFL6Q8IUX8 553 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms