RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 BPIFA2Q96DR5 249 aa10.56□□□□□ -0.72
SSR1-205ENST00000475213 ELAC2Q9BQ52 826 aaKnown RBP10.56□□□□□ -0.72
SSR1-205ENST00000475213 PIMREGQ9BSJ6 248 aa10.56□□□□□ -0.72
SSR1-205ENST00000475213 MYOZ1Q9NP98 299 aaPredicted RBP10.56□□□□□ -0.72
SSR1-205ENST00000475213 MAN2C1Q9NTJ4 1040 aa10.56□□□□□ -0.72
SSR1-205ENST00000475213 RHCGQ9UBD6 479 aa10.56□□□□□ -0.72
SSR1-205ENST00000475213 SPEF1Q9Y4P9 236 aa10.56□□□□□ -0.72
SSR1-205ENST00000475213 ATRQ13535 2644 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 LOC390937A0A1W2PQ73 354 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 A8MV72 311 aaPredicted RBP10.55□□□□□ -0.72
SSR1-205ENST00000475213 FFAR1O14842 300 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 SERPINA1P01009 418 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 SERPINA5P05154 406 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 MAKP20794 623 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 GLRXP35754 106 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 NR4A2P43354 598 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 ZNF84P51523 738 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 ZNF133P52736 654 aaPredicted RBP10.55□□□□□ -0.72
SSR1-205ENST00000475213 SEC24CP53992 1094 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 GALK2Q01415 458 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 FXNQ16595 210 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 NRN1LQ496H8 165 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 IFI44LQ53G44 452 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 C10orf128Q5T292 105 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 ARMC4Q5T2S8 1044 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 LCE2AQ5TA79 106 aaPredicted RBP10.55□□□□□ -0.72
SSR1-205ENST00000475213 GKAP1Q5VSY0 366 aaPredicted RBP10.55□□□□□ -0.72
SSR1-205ENST00000475213 TMEM53Q6P2H8 277 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 MEX3DQ86XN8 651 aaKnown RBP10.55□□□□□ -0.72
SSR1-205ENST00000475213 NRMQ8IXM6 262 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 GEMIN6Q8WXD5 167 aaKnown RBP10.55□□□□□ -0.72
SSR1-205ENST00000475213 HDAC2Q92769 488 aaKnown RBP10.55□□□□□ -0.72
SSR1-205ENST00000475213 MRPL24Q96A35 216 aaKnown RBP10.55□□□□□ -0.72
SSR1-205ENST00000475213 HSH2DQ96JZ2 352 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 FOXN4Q96NZ1 517 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 FNDC11Q9BVV2 318 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 MRPL37Q9BZE1 423 aaKnown RBP10.55□□□□□ -0.72
SSR1-205ENST00000475213 MYLK2Q9H1R3 596 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 TXNIPQ9H3M7 391 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 DYNLRB1Q9NP97 96 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 STX18Q9P2W9 335 aaKnown RBP10.55□□□□□ -0.72
SSR1-205ENST00000475213 ABCD2Q9UBJ2 740 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 HIF3AQ9Y2N7 669 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 SVEP1Q4LDE5 3571 aa10.55□□□□□ -0.72
SSR1-205ENST00000475213 IGKV1D-43A0A0B4J1Z2 117 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 HTR3EA5X5Y0 456 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 NPIPB13A6NJU9 1138 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 NPIPB4C9JG80 1138 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 PRSS23O95084 383 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 SLC2A10O95528 541 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 ADRA2AP08913 450 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 IGHV4-31P0DP07 118 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 DAOP14920 347 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 NCK1P16333 377 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 EVX1P49640 407 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 PSME3P61289 254 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 RPS23P62266 143 aaKnown RBP10.54□□□□□ -0.72
SSR1-205ENST00000475213 PRKCDQ05655 676 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 TOP3AQ13472 1001 aaPredicted RBP10.54□□□□□ -0.72
SSR1-205ENST00000475213 FHL1Q13642 323 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 GGTLC2Q14390 218 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 TRAM2Q15035 370 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 TAF11Q15544 211 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 SLC36A2Q495M3 483 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 ALG10Q5BKT4 473 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 CYB5R2Q6BCY4 276 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 FKBP9P1Q75LS8 142 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 SLC16A14Q7RTX9 510 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 DPPA2Q7Z7J5 298 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 LRP11Q86VZ4 500 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 HIPK1Q86Z02 1210 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 LRRC18Q8N456 261 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 PAQR4Q8N4S7 273 aaPredicted RBP10.54□□□□□ -0.72
SSR1-205ENST00000475213 LRRC75AQ8NAA5 344 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 SLC30A7Q8NEW0 376 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 NEU4Q8WWR8 484 aaPredicted RBP10.54□□□□□ -0.72
SSR1-205ENST00000475213 NMD3Q96D46 503 aaKnown RBP10.54□□□□□ -0.72
SSR1-205ENST00000475213 CMTM5Q96DZ9 223 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 KCTD14Q9BQ13 255 aaPredicted RBP10.54□□□□□ -0.72
SSR1-205ENST00000475213 FAM107BQ9H098 131 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 RNF121Q9H920 327 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 SLC7A8Q9UHI5 535 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 FZR1Q9UM11 496 aa10.54□□□□□ -0.72
SSR1-205ENST00000475213 FBN1P35555 2871 aaKnown RBP10.54□□□□□ -0.72
SSR1-205ENST00000475213 COL6A5A8TX70 2615 aa10.53□□□□□ -0.72
SSR1-205ENST00000475213 TRAV27A0A087WT01 109 aa10.53□□□□□ -0.72
SSR1-205ENST00000475213 A0A087WUU8 490 aa10.53□□□□□ -0.72
SSR1-205ENST00000475213 IGHV4-61A0A0C4DH41 118 aa10.53□□□□□ -0.72
SSR1-205ENST00000475213 NDUFAB1O14561 156 aa10.53□□□□□ -0.72
SSR1-205ENST00000475213 SYNGR3O43761 229 aa10.53□□□□□ -0.72
SSR1-205ENST00000475213 STAMBPO95630 424 aa10.53□□□□□ -0.72
SSR1-205ENST00000475213 IGHMP01871 453 aa10.53□□□□□ -0.72
SSR1-205ENST00000475213 ERCC1P07992 297 aaPredicted RBP10.53□□□□□ -0.72
SSR1-205ENST00000475213 MMP7P09237 267 aaPredicted RBP10.53□□□□□ -0.72
SSR1-205ENST00000475213 SAGP10523 405 aaPredicted RBP10.53□□□□□ -0.72
SSR1-205ENST00000475213 CCL2P13500 99 aa10.53□□□□□ -0.72
SSR1-205ENST00000475213 CDAP32320 146 aa10.53□□□□□ -0.72
SSR1-205ENST00000475213 LSP1P33241 339 aa10.53□□□□□ -0.72
SSR1-205ENST00000475213 CTXN1P60606 82 aa10.53□□□□□ -0.72
SSR1-205ENST00000475213 RPL27P61353 136 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms