RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ZNF404Q494X3 552 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 ZNF658BQ4V348 819 aaPredicted RBP4.21□□□□□ -1.73
CCNL1-215ENST00000474539 ACSM3Q53FZ2 586 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 GABRG1Q8N1C3 465 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 ARIH2OSQ8N7S6 290 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 ADPRHL1Q8NDY3 354 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 POC1BQ8TC44 478 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 SAP25Q8TEE9 199 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 DEDD2Q8WXF8 326 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 PIGTQ969N2 578 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 SLC25A44Q96H78 314 aaPredicted RBP4.21□□□□□ -1.73
CCNL1-215ENST00000474539 RNF170Q96K19 258 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 PIMREGQ9BSJ6 248 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 MARCH7Q9H992 704 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 DNAJC27Q9NZQ0 273 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 CCDC59Q9P031 241 aaKnown RBP4.21□□□□□ -1.73
CCNL1-215ENST00000474539 COMMD3Q9UBI1 195 aa4.21□□□□□ -1.73
CCNL1-215ENST00000474539 TMEM233B4DJY2 109 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 DEGS1O15121 323 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 CXCL13O43927 109 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 SP1P08047 785 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 ARSBP15848 533 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 CELP19835 753 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 RGS19P49795 217 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 DLX5P56178 289 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 SF3A2Q15428 464 aaKnown RBP4.21□□□□□ -1.74
CCNL1-215ENST00000474539 VMA21Q3ZAQ7 101 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 VASNQ6EMK4 673 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 PLXDC2Q6UX71 529 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 CDHR3Q6ZTQ4 885 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 SYT9Q86SS6 491 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 GDPD1Q8N9F7 314 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 OR52N1Q8NH53 320 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 ABHD4Q8TB40 342 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 SLC25A40Q8TBP6 338 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 KHSRPQ92945 711 aaKnown RBP eCLIP4.21□□□□□ -1.743e-9■■■□□ 16.9
CCNL1-215ENST00000474539 SDF2Q99470 211 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 SCPEP1Q9HB40 452 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 ENAMQ9NRM1 1142 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 TBC1D24Q9ULP9 559 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 SPAARA0A1B0GVQ0 90 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 FAM230AA0A1W2PPH8 454 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 hADV38S2A0JD32 116 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 A6NHS1 94 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 TMEM210A6NLX4 147 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 A8MXE2 369 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 H3BSA7 217 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 OR7A17O14581 309 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 SOX15O60248 233 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 CDRT1O95170 752 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 IFNA7P01567 189 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 AKAIN1P0CW23 69 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 COL9A1P20849 921 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 VAMP1P23763 118 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 CTSSP25774 331 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 PPT1P50897 306 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 FUT6P51993 359 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 GFERP55789 205 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 PHC1P78364 1004 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 TMEM267Q0VDI3 215 aaPredicted RBP4.21□□□□□ -1.74
CCNL1-215ENST00000474539 NTRK2Q16620 822 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 CDNFQ49AH0 187 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 ETFRF1Q6IPR1 90 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 VHLLQ6RSH7 139 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 FAM111BQ6SJ93 734 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 FAM57BQ71RH2 274 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 YRDCQ86U90 279 aaKnown RBP4.21□□□□□ -1.74
CCNL1-215ENST00000474539 MARCH3Q86UD3 253 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 SYS1Q8N2H4 156 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 GLIS1Q8NBF1 620 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 NOXO1Q8NFA2 376 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 OR6F1Q8NGZ6 308 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 OR4A16Q8NH70 328 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 CD300LFQ8TDQ1 290 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 ERGIC1Q969X5 290 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 CIDECQ96AQ7 238 aaPredicted RBP4.21□□□□□ -1.74
CCNL1-215ENST00000474539 ALG14Q96F25 216 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 OR2A5Q96R48 311 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 TAAR6Q96RI8 345 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 ATP5SQ99766 215 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 FUZQ9BT04 418 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 SIDT1Q9NXL6 827 aaKnown RBP4.21□□□□□ -1.74
CCNL1-215ENST00000474539 BABAM2Q9NXR7 383 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 FKBP11Q9NYL4 201 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 ZNF69Q9UC07 566 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 PITPNC1Q9UKF7 332 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 V9GY05 133 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 CASP8AP2Q9UKL3 1982 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 A0A0A6YYD5 115 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 PRAMEF33A0A0G2JMD5 474 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 ANKRD33BA6NCL7 494 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 TRABD2BA6NFA1 517 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 PRAMEF4O60810 478 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 YIF1AO95070 293 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 SOX14O95416 240 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 MPIG6BO95866 241 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 IL1AP01583 271 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 RRASP10301 218 aa4.21□□□□□ -1.74
CCNL1-215ENST00000474539 HTR1FP30939 366 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms