RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TMEM200AQ86VY9 491 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 C12orf40Q86WS4 652 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 BAP18Q8IXM2 172 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 FAM3DQ96BQ1 224 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 COX14Q96I36 57 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 ULBP3Q9BZM4 244 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 HCFC2Q9Y5Z7 792 aa16.89■□□□□ 0.29
ECHDC1-214ENST00000474289 OR4C45A6NMZ5 311 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 EFCAB7A8K855 629 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 C1orf196B1AJZ1 125 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 ZNF208O43345 1280 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 GATCO43716 136 aaKnown RBP16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 NARSO43776 548 aaKnown RBP16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 DCNP07585 359 aaKnown RBP16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 MUC1P15941 1255 aaPredicted RBP16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 IL34Q6ZMJ4 242 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 MTSS1LQ765P7 747 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 TSSK2Q96PF2 358 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 INSM2Q96T92 566 aaPredicted RBP16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 EGLN1Q9GZT9 426 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 FARSAQ9Y285 508 aaKnown RBP16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 DNAH14Q0VDD8 3507 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 FAM157CP0CG43 387 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 HLA-GP17693 338 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 SDHAP31040 664 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 AIMP2Q13155 320 aaKnown RBP16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 ZNF595Q8IYB9 648 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 BPIFB2Q8N4F0 458 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 ZNF676Q8N7Q3 588 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 OR4K17Q8NGC6 315 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 VSIG4Q9Y279 399 aa16.88■□□□□ 0.29
ECHDC1-214ENST00000474289 LOC100289279A0A1B0GTE1 492 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 A0A1W2PPE3 182 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 PMS2P1A4D2B8 440 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 ZBTB25P24278 435 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 AVPR2P30518 371 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 VASPP50552 380 aaPredicted RBP16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 ID2Q02363 134 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 ALG11Q2TAA5 492 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 DPY19L2P2Q6ZN68 376 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 RHOUQ7L0Q8 258 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 C14orf79Q96F83 325 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 RBM18Q96H35 190 aaKnown RBP16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 GAL3ST1Q99999 423 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 C1QTNF3-AMACRE9PGA6 284 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 LATO43561 262 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 HTR3BO95264 441 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 CSN2P05814 226 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 ZNF28P17035 718 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 AQP2P41181 271 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 ACAA2P42765 397 aaKnown RBP16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 TM4SF4P48230 202 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 FABP9Q0Z7S8 132 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 PPP1R1AQ13522 171 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 ETV3LQ6ZN32 361 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 LYG2Q86SG7 212 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 OR2L3Q8NG85 312 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 OR2G2Q8NGZ5 317 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 MCHR2Q969V1 340 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 ADAD1Q96M93 576 aaKnown RBP16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 SLC6A7Q99884 636 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 RHOFQ9HBH0 211 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 DUSP22Q9NRW4 184 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 FBXL21Q9UKT6 434 aa16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 C19orf53Q9UNZ5 99 aaPredicted RBP16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 RPH3AQ9Y2J0 694 aaPredicted RBP16.87■□□□□ 0.29
ECHDC1-214ENST00000474289 A0A0B4J2A0 478 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 TEX13DA0A0J9YY54 714 aaPredicted RBP16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 PRICKLE3O43900 615 aaPredicted RBP16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 BRINP1O60477 761 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 CYB5AP00167 134 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 APEHP13798 732 aaKnown RBP16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 ADRB3P13945 408 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 PAX6P26367 422 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 CFPP27918 469 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 RAB11BQ15907 218 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 LEG1Q6P5S2 330 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 ABHD13Q7L211 337 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 GPR148Q8TDV2 347 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 FOXRED1Q96CU9 486 aaPredicted RBP16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 LMF1Q96S06 567 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 CLCC1Q96S66 551 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 CST11Q9H112 138 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 HRH4Q9H3N8 390 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 SMCO4Q9NRQ5 59 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 SHPKQ9UHJ6 478 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 MSRAQ9UJ68 235 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 IKZF2Q9UKS7 526 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 ZNF736B4DX44 427 aaPredicted RBP16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 EEF1E1-BLOC1S5C9J1V9 151 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 AK1P00568 194 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 PRNPP04156 253 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 SFTA3P0C7M3 94 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 ZNF888P0CJ79 500 aaPredicted RBP16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 DDX6P26196 483 aaKnown RBP eCLIP16.86■□□□□ 0.292e-7■■■□□ 18.3
ECHDC1-214ENST00000474289 EMDP50402 254 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 F2RL1P55085 397 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 NAAAQ02083 359 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 MESP2Q0VG99 397 aa16.86■□□□□ 0.29
ECHDC1-214ENST00000474289 ELAVL1Q15717 326 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms