RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 MRPS34P82930 218 aaKnown RBP9.66□□□□□ -0.86
CKS1B-206ENST00000474215 KRTAP1-1Q07627 177 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 FHL1Q13642 323 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 SLC36A2Q495M3 483 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 C10orf128Q5T292 105 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 KRT80Q6KB66 452 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 TMEM53Q6P2H8 277 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 TMPRSS11FQ6ZWK6 438 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 SLC16A14Q7RTX9 510 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 SVOPLQ8N434 492 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 LRRC75AQ8NAA5 344 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 RBM15BQ8NDT2 890 aaKnown RBP9.66□□□□□ -0.86
CKS1B-206ENST00000474215 SLC7A13Q8TCU3 470 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 C10orf105Q8TEF2 133 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 HDAC2Q92769 488 aaKnown RBP9.66□□□□□ -0.86
CKS1B-206ENST00000474215 C7orf34Q96L11 122 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 SORCS2Q96PQ0 1159 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 RBP7Q96R05 134 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 KCNK17Q96T54 332 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 CDRT15Q96T59 188 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 RNF121Q9H920 327 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 SIAEQ9HAT2 523 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 ARL8BQ9NVJ2 186 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 NDUFAF4Q9P032 175 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 TAGLN3Q9UI15 199 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 ZNF346Q9UL40 294 aaKnown RBP9.66□□□□□ -0.86
CKS1B-206ENST00000474215 SAMD4AQ9UPU9 718 aaKnown RBP9.66□□□□□ -0.86
CKS1B-206ENST00000474215 CMAHPQ9Y471 501 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 FKBP7Q9Y680 259 aa9.66□□□□□ -0.86
CKS1B-206ENST00000474215 TRAV27A0A087WT01 109 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 A0A1W2PRQ8 180 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 A6NIZ1 184 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 SLC2A10O95528 541 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 IGHMP01871 453 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 H1F0P07305 194 aaKnown RBP9.65□□□□□ -0.86
CKS1B-206ENST00000474215 HSD17B1P14061 328 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 RHCEP18577 417 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 TCN1P20061 433 aaPredicted RBP9.65□□□□□ -0.86
CKS1B-206ENST00000474215 PCSK6P29122 969 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 GLRXP35754 106 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 EVX1P49640 407 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 RAP1BP61224 184 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 RAP1AP62834 184 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 PPP2R2BQ00005 443 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 GALK2Q01415 458 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 CD47Q08722 323 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 TOP3AQ13472 1001 aaPredicted RBP9.65□□□□□ -0.86
CKS1B-206ENST00000474215 DGCR6Q14129 220 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 FXNQ16595 210 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 ZBED5Q49AG3 693 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 SAMD4BQ5PRF9 694 aaKnown RBP9.65□□□□□ -0.86
CKS1B-206ENST00000474215 THEM4Q5T1C6 240 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 GKAP1Q5VSY0 366 aaPredicted RBP9.65□□□□□ -0.86
CKS1B-206ENST00000474215 FAM205BPQ63HN1 556 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 PODNL1Q6PEZ8 512 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 SLC25A47Q6Q0C1 308 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 IGFN1Q86VF2 1251 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 ZNF584Q8IVC4 421 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 PGAM4Q8N0Y7 254 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 FAM86B1Q8N7N1 296 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 ANKS4BQ8N8V4 417 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 FAM156AQ8NDB6 213 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 SLC30A7Q8NEW0 376 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 OR13C2Q8NGS9 318 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 FNDC8Q8TC99 324 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 ALG12Q9BV10 488 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 RAB1BQ9H0U4 201 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 CD300AQ9UGN4 299 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 TMEM5Q9Y2B1 443 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 UGT2A1Q9Y4X1 527 aa9.65□□□□□ -0.86
CKS1B-206ENST00000474215 A0A096LNT2 108 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 LOC390937A0A1W2PQ73 354 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 SH3PXD2BA1X283 911 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 INAFM1C9JVW0 142 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 NDUFS8O00217 210 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 CDC42EP2O14613 210 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 GPRIN2O60269 458 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 PTHP01270 115 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 ERCC1P07992 297 aaPredicted RBP9.64□□□□□ -0.87
CKS1B-206ENST00000474215 MMP7P09237 267 aaPredicted RBP9.64□□□□□ -0.87
CKS1B-206ENST00000474215 ITGA2P17301 1181 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 CDAP32320 146 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 MSX2P35548 267 aaPredicted RBP9.64□□□□□ -0.87
CKS1B-206ENST00000474215 RPL4P36578 427 aaKnown RBP9.64□□□□□ -0.87
CKS1B-206ENST00000474215 GPR4P46093 362 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 PDLIM4P50479 330 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 MNAT1P51948 309 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 RPS23P62266 143 aaKnown RBP9.64□□□□□ -0.87
CKS1B-206ENST00000474215 ERVK-25P63136 954 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 VLDLRP98155 873 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 PLP2Q04941 152 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 FMODQ06828 376 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 LOXL1Q08397 574 aaPredicted RBP9.64□□□□□ -0.87
CKS1B-206ENST00000474215 KRT72Q14CN4 511 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 SGCAQ16586 387 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 SPATS1Q496A3 300 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 FGD3Q5JSP0 725 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 FAM27BQ5VT28 67 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 C16orf89Q6UX73 402 aa9.64□□□□□ -0.87
CKS1B-206ENST00000474215 ZCCHC24Q8N2G6 241 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms