RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 AQP11Q8NBQ7 271 aa12□□□□□ -0.49
USF1-205ENST00000473969 IL17RDQ8NFM7 739 aa12□□□□□ -0.49
USF1-205ENST00000473969 KBTBD8Q8NFY9 601 aa12□□□□□ -0.49
USF1-205ENST00000473969 OR4C15Q8NGM1 316 aa12□□□□□ -0.49
USF1-205ENST00000473969 ZNF519Q8TB69 540 aa12□□□□□ -0.49
USF1-205ENST00000473969 Q96M85 177 aa12□□□□□ -0.49
USF1-205ENST00000473969 ERMAPQ96PL5 475 aaPredicted RBP12□□□□□ -0.49
USF1-205ENST00000473969 GPX7Q96SL4 187 aaPredicted RBP12□□□□□ -0.49
USF1-205ENST00000473969 GPA33Q99795 319 aa12□□□□□ -0.49
USF1-205ENST00000473969 NELFAQ9H3P2 528 aa12□□□□□ -0.49
USF1-205ENST00000473969 SEC61A2Q9H9S3 476 aa12□□□□□ -0.49
USF1-205ENST00000473969 FAIMQ9NVQ4 179 aa12□□□□□ -0.49
USF1-205ENST00000473969 TMEM38BQ9NVV0 291 aa12□□□□□ -0.49
USF1-205ENST00000473969 IL20RAQ9UHF4 553 aa12□□□□□ -0.49
USF1-205ENST00000473969 ITPR2Q14571 2701 aa12□□□□□ -0.49
USF1-205ENST00000473969 VSTM5A8MXK1 200 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 SOCS2O14508 198 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 DEAF1O75398 565 aaPredicted RBP11.99□□□□□ -0.49
USF1-205ENST00000473969 ATE1O95260 518 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 PPP1R3DO95685 299 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 GASTP01350 101 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 APEHP13798 732 aaKnown RBP11.99□□□□□ -0.49
USF1-205ENST00000473969 PTDSS1P48651 473 aaKnown RBP11.99□□□□□ -0.49
USF1-205ENST00000473969 IDH3GP51553 393 aaPredicted RBP11.99□□□□□ -0.49
USF1-205ENST00000473969 RAB1AP62820 205 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 SLC36A2Q495M3 483 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 THSD4Q6ZMP0 1018 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 ADCK1Q86TW2 530 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 OR10G2Q8NGC3 310 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 TMEM171Q8WVE6 324 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 GTPBP3Q969Y2 492 aaKnown RBP11.99□□□□□ -0.49
USF1-205ENST00000473969 RASD2Q96D21 266 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 SAMD8Q96LT4 415 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 SH3GL3Q99963 347 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 RERGLQ9H628 205 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 ZNF556Q9HAH1 456 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 SIAEQ9HAT2 523 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 CCNB1IP1Q9NPC3 277 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 DNAJB9Q9UBS3 223 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 MOKQ9UQ07 419 aa11.99□□□□□ -0.49
USF1-205ENST00000473969 APCP25054 2843 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 ABCA4P78363 2273 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 IGHV1-18A0A0C4DH31 117 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 A0A1W2PPL8 197 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 PRSS37A4D1T9 235 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 SHISA9B4DS77 424 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 H7C1C5 153 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 IMPA2O14732 288 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 IDH3BO43837 385 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 SMPD2O60906 423 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 TMCC2O75069 709 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 RENP00797 406 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 PTHP01270 115 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 IGKV3-15P01624 115 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 ZNF26P17031 533 aaPredicted RBP11.98□□□□□ -0.49
USF1-205ENST00000473969 ZNF133P52736 654 aaPredicted RBP11.98□□□□□ -0.49
USF1-205ENST00000473969 ART1P52961 327 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 LCN6P62502 163 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 MRPS34P82930 218 aaKnown RBP11.98□□□□□ -0.49
USF1-205ENST00000473969 PLP2Q04941 152 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 FMODQ06828 376 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 DNM1P34Q6PK57 102 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 SLC25A47Q6Q0C1 308 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 ZNF620Q6ZNG0 422 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 RASSF6Q6ZTQ3 369 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 FAM122BQ7Z309 247 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 SKA3Q8IX90 412 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 FBXL14Q8N1E6 418 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 LRRC18Q8N456 261 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 PAPD5Q8NDF8 572 aaKnown RBP11.98□□□□□ -0.49
USF1-205ENST00000473969 SMAP2Q8WU79 429 aaPredicted RBP11.98□□□□□ -0.49
USF1-205ENST00000473969 MBD6Q96DN6 1003 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 DGCR6LQ9BY27 220 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 CXorf56Q9H5V9 222 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 BEX4Q9NWD9 120 aaPredicted RBP11.98□□□□□ -0.49
USF1-205ENST00000473969 VNN3Q9NY84 501 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 PDP1Q9P0J1 537 aaPredicted RBP11.98□□□□□ -0.49
USF1-205ENST00000473969 CRNNQ9UBG3 495 aaPredicted RBP11.98□□□□□ -0.49
USF1-205ENST00000473969 CDH10Q9Y6N8 788 aa11.98□□□□□ -0.49
USF1-205ENST00000473969 IQCMA0A1B0GVH7 501 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 SLC22A23A1A5C7 686 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 ARPC3O15145 178 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 TXNDC12O95881 172 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 IGLV1-44P01699 117 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 CECR9P0C854 216 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 CD53P19397 219 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 CRABP1P29762 137 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 CDAP32320 146 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 GIPRP48546 466 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 CENPAP49450 140 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 FABP6P51161 128 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 NAAAQ02083 359 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 HSF2Q03933 536 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 COX10Q12887 443 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 DEFB113Q30KQ7 82 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 MESTQ5EB52 335 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 CLEC12AQ5QGZ9 265 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 AGAP6Q5VW22 663 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 ASRGL1Q7L266 308 aa11.97□□□□□ -0.49
USF1-205ENST00000473969 C10orf67Q8IYJ2 551 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms