RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CDX4O14627 284 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 HSD17B6O14756 317 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 TNFSF11O14788 317 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 HCRTR1O43613 425 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 BBOX1O75936 387 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 CTDNEP1O95476 244 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 H6PDO95479 791 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 STAMBPO95630 424 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 RBMY1CP0DJD4 496 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 ABOP16442 354 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 PSMB1P20618 241 aaKnown RBP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 PRDX3P30048 256 aaKnown RBP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 FOXN2P32314 431 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 S100A5P33763 92 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 PHBP35232 272 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 BTDP43251 543 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 RFX3P48380 749 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 KIAA0040Q15053 153 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 KRT71Q3SY84 523 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 CARD16Q5EG05 197 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 UTF1Q5T230 341 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 C1orf146Q5VVC0 180 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 PAMR1Q6UXH9 720 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 UNQ9370/PRO34162Q6UXP9 181 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 SSX9Q7RTT3 188 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 PEX26Q7Z412 305 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 TMEM179BQ7Z7N9 219 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 CDC20BQ86Y33 519 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 MFSD6LQ8IWD5 586 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 FBXL16Q8N461 479 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 KIF2BQ8N4N8 673 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 COMMD1Q8N668 190 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 TMEM252Q8N6L7 170 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 OR51S1Q8NGJ8 323 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 OR1E3Q8WZA6 343 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 ELMO1Q92556 727 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 SLC25A38Q96DW6 304 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 FAM122AQ96E09 287 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 C12orf42Q96LP6 360 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 CCDC42Q96M95 316 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 FOXN4Q96NZ1 517 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 GSDMAQ96QA5 445 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 TGS1Q96RS0 853 aaKnown RBP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 ZNF184Q99676 751 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 MRPL45Q9BRJ2 306 aaKnown RBP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 C20orf24Q9BUV8 137 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 TMEM109Q9BVC6 243 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 TPK1Q9H3S4 243 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 PARVGQ9HBI0 331 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 IL26Q9NPH9 171 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 ZNF275Q9NSD4 429 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 STX18Q9P2W9 335 aaKnown RBP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 KIAA1257Q9ULG3 409 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 ASF1AQ9Y294 204 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 CSDC2Q9Y534 153 aaKnown RBP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 TIMM22Q9Y584 194 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 FRMPD3Q5JV73 1810 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 COL5A2P05997 1499 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-212ENST00000473961 VWDEQ8N2E2 1590 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 AKAP12Q02952 1782 aa3.2□□□□□ -1.9
BRCA1-212ENST00000473961 PCDH11XQ9BZA7 1347 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 ADGRB3O60242 1522 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 SYCP2Q9BX26 1530 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 MYH8P13535 1937 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 MYH13Q9UKX3 1938 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 TUBAL3A6NHL2 446 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 KMOO15229 486 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 BCL2L11O43521 198 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 DCTN3O75935 186 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 OR7A10O76100 309 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 APOEP02649 317 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 ASGR1P07306 291 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 FGF4P08620 206 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 UBTFL1P0CB47 393 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-212ENST00000473961 ATP6V1B2P21281 511 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 RPL5P46777 297 aaKnown RBP3.19□□□□□ -1.9
BRCA1-212ENST00000473961 OR3A4PP47883 348 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 CTAG1AP78358 180 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 MRPS22P82650 360 aaKnown RBP3.19□□□□□ -1.9
BRCA1-212ENST00000473961 XIAPP98170 497 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 ZNF45Q02386 682 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 MECOMQ03112 1051 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 UAP1Q16222 522 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-212ENST00000473961 KYAT1Q16773 422 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 RSBN1Q5VWQ0 802 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-212ENST00000473961 SLC8B1Q6J4K2 584 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 TTC23LQ6PF05 361 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 DHRS4L2Q6PKH6 230 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 P2RY8Q86VZ1 359 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 SLC26A11Q86WA9 606 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 RDH10Q8IZV5 341 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 RIBC1Q8N443 379 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-212ENST00000473961 SPERTQ8NA61 448 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 SDR9C7Q8NEX9 313 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 OR10G3Q8NGC4 313 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 AGR3Q8TD06 166 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 ACMSDQ8TDX5 336 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 NELFBQ8WX92 580 aa3.19□□□□□ -1.9
BRCA1-212ENST00000473961 STARD8Q92502 1023 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms