RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	MDS2	Q8NDY4	140 aa		3.07	□□□□□ -1.92
BBX-223	ENST00000473542	OR4A4P	Q8NGN8	299 aa		3.07	□□□□□ -1.92
BBX-223	ENST00000473542	GEMIN6	Q8WXD5	167 aa	Known RBP	3.07	□□□□□ -1.92
BBX-223	ENST00000473542	KIFAP3	Q92845	792 aa		3.07	□□□□□ -1.92
BBX-223	ENST00000473542	P2RX4	Q99571	388 aa		3.07	□□□□□ -1.92
BBX-223	ENST00000473542	DNTTIP1	Q9H147	329 aa		3.07	□□□□□ -1.92
BBX-223	ENST00000473542	ANKRA2	Q9H9E1	313 aa		3.07	□□□□□ -1.92
BBX-223	ENST00000473542	TMEM165	Q9HC07	324 aa		3.07	□□□□□ -1.92
BBX-223	ENST00000473542	UXT	Q9UBK9	157 aa	Predicted RBP	3.07	□□□□□ -1.92
BBX-223	ENST00000473542	PCYOX1	Q9UHG3	505 aa		3.07	□□□□□ -1.92
BBX-223	ENST00000473542	VANGL2	Q9ULK5	521 aa		3.07	□□□□□ -1.92
BBX-223	ENST00000473542	CAB39	Q9Y376	341 aa	Predicted RBP	3.07	□□□□□ -1.92
BBX-223	ENST00000473542	HEBP2	Q9Y5Z4	205 aa		3.07	□□□□□ -1.92
BBX-223	ENST00000473542	CENPJ	Q9HC77	1338 aa	Predicted RBP	3.07	□□□□□ -1.92
BBX-223	ENST00000473542	CARMIL3	Q8ND23	1372 aa		3.07	□□□□□ -1.92
BBX-223	ENST00000473542	CEMIP	Q8WUJ3	1361 aa		3.07	□□□□□ -1.92
BBX-223	ENST00000473542	PRSS37	A4D1T9	235 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542		A6NDX4	124 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	FAM166B	A8MTA8	275 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	WDR62	O43379	1518 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	CLPX	O76031	633 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	RFX3	P48380	749 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	CX3CR1	P49238	355 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	ZNF133	P52736	654 aa	Predicted RBP	3.06	□□□□□ -1.92
BBX-223	ENST00000473542	CNTNAP1	P78357	1384 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	HMGCS1	Q01581	520 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	GBE1	Q04446	702 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	MERTK	Q12866	999 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	ECH1	Q13011	328 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	PRPSAP1	Q14558	356 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	PSG5	Q15238	335 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	CHRNA6	Q15825	494 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	TTLL9	Q3SXZ7	439 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	ZBED5	Q49AG3	693 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	PIGG	Q5H8A4	983 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	CYB5R2	Q6BCY4	276 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	C22orf42	Q6IC83	251 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	ANKRD26P1	Q6NSI1	321 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	LYPD2	Q6UXB3	125 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	SSX9	Q7RTT3	188 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	SLC16A14	Q7RTX9	510 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	LUZP2	Q86TE4	346 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	MREG	Q8N565	214 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542		Q8N9W7	124 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	HSD17B11	Q8NBQ5	300 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	ACTRT1	Q8TDG2	376 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	RNF185	Q96GF1	192 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	PKNOX2	Q96KN3	472 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	GABARAPL3	Q9BY60	117 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	MRPL37	Q9BZE1	423 aa	Known RBP	3.06	□□□□□ -1.92
BBX-223	ENST00000473542	AUNIP	Q9H7T9	357 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	GEMIN7	Q9H840	131 aa	Known RBP	3.06	□□□□□ -1.92
BBX-223	ENST00000473542	GOLT1B	Q9Y3E0	138 aa		3.06	□□□□□ -1.92
BBX-223	ENST00000473542	F11R	Q9Y624	299 aa	Known RBP	3.06	□□□□□ -1.92
BBX-223	ENST00000473542	MAPK8IP3	Q9UPT6	1336 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	TRBV6-6	A0A0A6YYG2	114 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	GLYATL1P3	A0A0U1RQE8	302 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	CASQ2	O14958	399 aa	Predicted RBP	3.05	□□□□□ -1.92
BBX-223	ENST00000473542	PPP1R2P9	O14990	202 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	DFNA5	O60443	496 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	CTAG2	O75638	210 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	CLIC3	O95833	236 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	PCCA	P05165	728 aa	Predicted RBP	3.05	□□□□□ -1.92
BBX-223	ENST00000473542	PSG2	P11465	335 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	ZNF30	P17039	623 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	CRISP3	P54108	245 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	IL18	Q14116	193 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	TMEM183B	Q1AE95	376 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	HSDL1	Q3SXM5	330 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	ZNF658B	Q4V348	819 aa	Predicted RBP	3.05	□□□□□ -1.92
BBX-223	ENST00000473542	LY6G6F	Q5SQ64	297 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	REEP3	Q6NUK4	255 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	ABHD13	Q7L211	337 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	TMEM183A	Q8IXX5	376 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	EXOSC8	Q96B26	276 aa	Known RBP	3.05	□□□□□ -1.92
BBX-223	ENST00000473542	C8orf44	Q96CB5	159 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	ZNF799	Q96GE5	643 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	SLC29A1	Q99808	456 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	LZTS2	Q9BRK4	669 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	C11orf70	Q9BRQ4	267 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	NCOR1P1	Q9H4R4	102 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	LYAR	Q9NX58	379 aa	Known RBP	3.05	□□□□□ -1.92
BBX-223	ENST00000473542	LGALS13	Q9UHV8	139 aa		3.05	□□□□□ -1.92
BBX-223	ENST00000473542	COL16A1	Q07092	1604 aa	Predicted RBP	3.04	□□□□□ -1.92
BBX-223	ENST00000473542	PLAC8L1	A1L4L8	177 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	WRB	O00258	174 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	SS18L1	O75177	396 aa	Predicted RBP	3.04	□□□□□ -1.92
BBX-223	ENST00000473542	SUPT3H	O75486	399 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	CA11	O75493	328 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	IGLV2-23	P01705	113 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	ANXA5	P08758	320 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	CALM1	P0DP23	149 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	CALM2	P0DP24	149 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	CALM3	P0DP25	149 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	FOLR1	P15328	257 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	EIF2S2	P20042	333 aa	Known RBP	3.04	□□□□□ -1.92
BBX-223	ENST00000473542	HRH1	P35367	487 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	MRPL19	P49406	292 aa	Known RBP	3.04	□□□□□ -1.92
BBX-223	ENST00000473542	TWF1	Q12792	350 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	SF3A2	Q15428	464 aa	Known RBP	3.04	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms