RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 WACQ9BTA9 647 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 SIAEQ9HAT2 523 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 CDH20Q9HBT6 801 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 ZNF275Q9NSD4 429 aaPredicted RBP11.59□□□□□ -0.55
CHD3-209ENST00000473376 HIF1ANQ9NWT6 349 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 CGGBP1Q9UFW8 167 aaPredicted RBP11.59□□□□□ -0.55
CHD3-209ENST00000473376 A0A1W2PPW3 197 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 CPSF4LA6NMK7 179 aaKnown RBP11.58□□□□□ -0.56
CHD3-209ENST00000473376 H3BSA7 217 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 OR5F1O95221 314 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 IGHV3-13P01766 116 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 GAAP10253 952 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 GATA3P23771 443 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 ALDH3B1P43353 468 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 COMPP49747 757 aaPredicted RBP11.58□□□□□ -0.56
CHD3-209ENST00000473376 GZMMP51124 257 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 SEC24CP53992 1094 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 NKPD1Q17RQ9 610 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 TMEM154Q6P9G4 183 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 SLC16A14Q7RTX9 510 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 NANOGNBQ7Z5D8 188 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 RETREG3Q86VR2 466 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 LRP11Q86VZ4 500 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 OR4K5Q8NGD3 323 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 OR8J3Q8NGG0 315 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 FGFBP3Q8TAT2 258 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 DYDC1Q8WWB3 177 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 TAMM41Q96BW9 452 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 ZBTB9Q96C00 473 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 PRSS27Q9BQR3 290 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 KCNN2Q9H2S1 579 aa11.58□□□□□ -0.56
CHD3-209ENST00000473376 MEPEQ9NQ76 525 aaPredicted RBP11.58□□□□□ -0.56
CHD3-209ENST00000473376 INTS9Q9NV88 658 aaKnown RBP11.58□□□□□ -0.56
CHD3-209ENST00000473376 MYEF2Q9P2K5 600 aaKnown RBP11.58□□□□□ -0.56
CHD3-209ENST00000473376 HMGB1P1B2RPK0 211 aaPredicted RBP11.57□□□□□ -0.56
CHD3-209ENST00000473376 LYNX1G3V0Z9 82 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 J3QLI3 93 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 HAX1O00165 279 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 SERPINI2O75830 405 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 ADH4P08319 380 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 MMP7P09237 267 aaPredicted RBP11.57□□□□□ -0.56
CHD3-209ENST00000473376 LYNX1P0DP58 116 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 NAT2P11245 290 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 ACADSP16219 412 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 TUBG1P23258 451 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 UGT2B15P54855 530 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 CLRN1P58418 232 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 MTPNP58546 118 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 RPL18Q07020 188 aaKnown RBP11.57□□□□□ -0.56
CHD3-209ENST00000473376 NFYCQ13952 458 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 ANKDD1AQ495B1 522 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 ARMC4Q5T2S8 1044 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 ACSM5Q6NUN0 579 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 ERICH5Q6P6B1 374 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 LRRC17Q8N6Y2 441 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 RBM15BQ8NDT2 890 aaKnown RBP11.57□□□□□ -0.56
CHD3-209ENST00000473376 CPEB3Q8NE35 698 aaKnown RBP11.57□□□□□ -0.56
CHD3-209ENST00000473376 NOXO1Q8NFA2 376 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 OR4D11Q8NGI4 311 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 OR10A6Q8NH74 314 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 YIPF5Q969M3 257 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 RAB39BQ96DA2 213 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 SH3GL3Q99963 347 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 RNF121Q9H920 327 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 NANOGQ9H9S0 305 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 TUBG2Q9NRH3 451 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 CYSLTR2Q9NS75 346 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 TAAR3PQ9P1P4 343 aa11.57□□□□□ -0.56
CHD3-209ENST00000473376 BLOC1S5-TXNDC5H3BN57 136 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 PPIHO43447 177 aaKnown RBP11.56□□□□□ -0.56
CHD3-209ENST00000473376 NCR1O76036 304 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 PNPP00491 289 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 OPN1SWP03999 348 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 UMPSP11172 480 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 ITGA2P17301 1181 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 FUT1P19526 365 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 TCN1P20061 433 aaPredicted RBP11.56□□□□□ -0.56
CHD3-209ENST00000473376 APLNRP35414 380 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 CRYBA2P53672 197 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 SLC3A1Q07837 685 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 CCNIQ14094 377 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 FAM27BQ5VT28 67 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 FAM205BPQ63HN1 556 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 CALHM3Q86XJ0 350 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 RBM45Q8IUH3 476 aaKnown RBP11.56□□□□□ -0.56
CHD3-209ENST00000473376 SEMA6DQ8NFY4 1073 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 ZNF418Q8TF45 676 aaPredicted RBP11.56□□□□□ -0.56
CHD3-209ENST00000473376 ASB10Q8WXI3 467 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 NMD3Q96D46 503 aaKnown RBP11.56□□□□□ -0.56
CHD3-209ENST00000473376 SGTBQ96EQ0 304 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 LRRC37BQ96QE4 947 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 JMJD8Q96S16 334 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 DIRC2Q96SL1 478 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 ALG12Q9BV10 488 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 INIPQ9NRY2 104 aa11.56□□□□□ -0.56
CHD3-209ENST00000473376 ANK2Q01484 3957 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 PPIAL4EA0A075B759 164 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 PPIAL4CA0A0B4J2A2 164 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 IGHV1-69-2A0A0G2JMI3 117 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 FAM157AC9JC47 383 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms