RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 GRHPRQ9UBQ7 328 aa19.12■□□□□ 0.65
COL18A1-207ENST00000473212 WDFY3Q8IZQ1 3526 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 COL4A2P08572 1712 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 TRAV18A0A075B6X5 111 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 PRTGQ2VWP7 1150 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 KLHL26Q53HC5 615 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 ATG4DQ86TL0 474 aaPredicted RBP19.11■□□□□ 0.65
COL18A1-207ENST00000473212 SDR16C5Q8N3Y7 309 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 GPR148Q8TDV2 347 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 TNFAIP8L1Q8WVP5 186 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 MMP25Q9NPA2 562 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 MED11Q9P086 117 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 PIAS3Q9Y6X2 628 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 ASXL3Q9C0F0 2248 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 WDR87Q6ZQQ6 2873 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 CDC14CA4D256 554 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 SEMA4FO95754 770 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 RPL18Q07020 188 aaKnown RBP19.11■□□□□ 0.65
COL18A1-207ENST00000473212 GK2Q14410 553 aaPredicted RBP19.11■□□□□ 0.65
COL18A1-207ENST00000473212 SHHQ15465 462 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 NKAIN2Q5VXU1 208 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 WBP2NLQ6ICG8 309 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 OR6N1Q8NGY5 312 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 TSPAN32Q96QS1 320 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 NRSN2Q9GZP1 204 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 NKX2-4Q9H2Z4 354 aa19.11■□□□□ 0.65
COL18A1-207ENST00000473212 CDV3Q9UKY7 258 aaKnown RBP19.11■□□□□ 0.65
COL18A1-207ENST00000473212 SLC22A23A1A5C7 686 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 A8MXK9 166 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 POU3F4P49335 361 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 PPM1FP49593 454 aaPredicted RBP19.1■□□□□ 0.65
COL18A1-207ENST00000473212 DMWDQ09019 674 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 FZD2Q14332 565 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 ARMC6Q6NXE6 501 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 C11orf88Q6PI97 169 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 OVCH2Q7RTZ1 564 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 SYT4Q9H2B2 425 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 MTIF3Q9H2K0 278 aaKnown RBP19.1■□□□□ 0.65
COL18A1-207ENST00000473212 TAS2R8Q9NYW2 309 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 TMEM272A0A1B0GTI8 110 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 TMEM212A6NML5 194 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 CD3DP04234 171 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 ALOX5APP20292 161 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 TSSK4Q6SA08 328 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 CLEC1BQ9P126 229 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 SLC6A5Q9Y345 797 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 THADAQ6YHU6 1953 aa19.1■□□□□ 0.65
COL18A1-207ENST00000473212 TPPPO94811 219 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 ZNF432O94892 652 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 ITGA5P08648 1049 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 AKAIN1P0CW23 69 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 PNMTP11086 282 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 APEHP13798 732 aaKnown RBP19.09■□□□□ 0.65
COL18A1-207ENST00000473212 CALCRP30988 508 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 KIR3DL2P43630 455 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 TOMM34Q15785 309 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-207ENST00000473212 C4orf46Q504U0 113 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 ARSKQ6UWY0 536 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 STPG2Q8N412 459 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 TSEN15Q8WW01 171 aaKnown RBP19.09■□□□□ 0.65
COL18A1-207ENST00000473212 NXF5Q9H1B4 397 aaKnown RBP19.09■□□□□ 0.65
COL18A1-207ENST00000473212 EXOSC3Q9NQT5 275 aaKnown RBP19.09■□□□□ 0.65
COL18A1-207ENST00000473212 KRBOX1C9JBD0 128 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 DOK2O60496 412 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 PLGP00747 810 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-207ENST00000473212 ASAH2BP0C7U1 165 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 CTSEP14091 401 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 CTRB1P17538 263 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 LBX1P52954 281 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 YPEL5P62699 121 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 SKP2Q13309 424 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 CTRB2Q6GPI1 263 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 SLC35D2Q76EJ3 337 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 NAXDQ8IW45 347 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 MCHR2Q969V1 340 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 GAL3ST1Q99999 423 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 EXO5Q9H790 373 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 CYP8B1Q9UNU6 501 aa19.09■□□□□ 0.65
COL18A1-207ENST00000473212 C11orf98E9PRG8 122 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 THEGLP0DJG4 465 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 NAGAP17050 411 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 CCKBRP32239 447 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 CSF2RBP32927 897 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 SORDQ00796 357 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 FUT7Q11130 342 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 C2orf76Q3KRA6 126 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 WDR38Q5JTN6 314 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 ZNF660Q6AZW8 331 aaPredicted RBP19.08■□□□□ 0.65
COL18A1-207ENST00000473212 FAM160A2Q8N612 972 aaPredicted RBP19.08■□□□□ 0.65
COL18A1-207ENST00000473212 OR1S1Q8NH92 325 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 TAAR8Q969N4 342 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 DPYSL5Q9BPU6 564 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 APMAPQ9HDC9 416 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 KCNG2Q9UJ96 466 aa19.08■□□□□ 0.65
COL18A1-207ENST00000473212 SPDEFO95238 335 aa19.08■□□□□ 0.64
COL18A1-207ENST00000473212 IGF2P01344 180 aa19.08■□□□□ 0.64
COL18A1-207ENST00000473212 FGF2P09038 288 aa19.08■□□□□ 0.64
COL18A1-207ENST00000473212 HPGDP15428 266 aa19.08■□□□□ 0.64
COL18A1-207ENST00000473212 PRSS3P35030 304 aa19.08■□□□□ 0.64
COL18A1-207ENST00000473212 SCAND1P57086 179 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms