RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CYTH2Q99418 400 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 UBE2ZQ9H832 354 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 SIRT7Q9NRC8 400 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 PLCXD1Q9NUJ7 323 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 WRAP73Q9P2S5 460 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 MYRFQ9Y2G1 1151 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 MAP3K15Q6ZN16 1313 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 SCN9AQ15858 1988 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 IGKV1D-13A0A0B4J2D9 117 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 PSMB11A5LHX3 300 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 IDSB3KWA1 339 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 EIF4E2O60573 245 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 HUS1O60921 280 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 TRIM3O75382 744 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 OR7A10O76100 309 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 ALPLP05186 524 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 FCGR3AP08637 254 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 OR8U8P0C7N1 319 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 IGKV1-13P0DP09 117 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 MCF2P10911 925 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 TCP1P17987 556 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 DDOSTP39656 456 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 GYG1P46976 350 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 ACVR1Q04771 509 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 SCRN3Q0VDG4 424 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 KIAA0141Q14154 515 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 HSDL1Q3SXM5 330 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 GLYR1Q49A26 553 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 ADAMTSL4-AS1Q5T5F5 129 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 C9orf135Q5VTT2 229 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 ZNF790Q6PG37 636 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 Q6ZVH6 145 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 PID1Q7Z2X4 250 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 ABHD12BQ7Z5M8 362 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 ZNF546Q86UE3 836 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 COMTD1Q86VU5 262 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 RAB42Q8N4Z0 105 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 OR6X1Q8NH79 312 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 MITD1Q8WV92 249 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 ZBED6CLQ96FA7 236 aaPredicted RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 ITCHQ96J02 903 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 TM6SF2Q9BZW4 377 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 IL22Q9GZX6 179 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 GOLPH3Q9H4A6 298 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 REEP4Q9H6H4 257 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 DDX31Q9H8H2 851 aaKnown RBP2.14□□□□□ -2.07
XRN1-210ENST00000472697 ADAM22Q9P0K1 906 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 LNPEPQ9UIQ6 1025 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 ATP6V1DQ9Y5K8 247 aa2.14□□□□□ -2.07
XRN1-210ENST00000472697 MED23Q9ULK4 1368 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 ZSWIM8A7E2V4 1837 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 PLXNA1Q9UIW2 1896 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 C2orf16Q68DN1 1984 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 KCNE1BA0A087WTH5 132 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 SMIM1B2RUZ4 78 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 GABRPO00591 440 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 TRDMT1O14717 391 aaKnown RBP2.13□□□□□ -2.07
XRN1-210ENST00000472697 PHF1O43189 567 aaPredicted RBP2.13□□□□□ -2.07
XRN1-210ENST00000472697 E2F6O75461 281 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 ACTL6AO96019 429 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 CDK4P11802 303 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 TEAD1P28347 426 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 IL12BP29460 328 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 SLC26A3P40879 764 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 AQP2P41181 271 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 HAAOP46952 286 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 RFX3P48380 749 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 MRPL19P49406 292 aaKnown RBP2.13□□□□□ -2.07
XRN1-210ENST00000472697 CTAG1AP78358 180 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 VLDLRP98155 873 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 ABRAXAS2Q15018 415 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 OXA1LQ15070 435 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 NDUFA9Q16795 377 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 UPP1Q16831 310 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 KLHL38Q2WGJ6 581 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 SAMD4BQ5PRF9 694 aaKnown RBP2.13□□□□□ -2.07
XRN1-210ENST00000472697 BEND3Q5T5X7 828 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 LINC00336Q6ZUF6 198 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 USP43Q70EL4 1123 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 CBLN2Q8IUK8 224 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 SAMD12Q8N8I0 201 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 ZNF514Q96K75 400 aaPredicted RBP2.13□□□□□ -2.07
XRN1-210ENST00000472697 ZNF488Q96MN9 340 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 ECSITQ9BQ95 431 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 TMEM165Q9HC07 324 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 ADAP2Q9NPF8 381 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 NANSQ9NR45 359 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 LYARQ9NX58 379 aaKnown RBP2.13□□□□□ -2.07
XRN1-210ENST00000472697 ELOVL2Q9NXB9 296 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 B3GNT2Q9NY97 397 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 RNF7Q9UBF6 113 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 DCDC2Q9UHG0 476 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 CACNA1GO43497 2377 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 PLXNB2O15031 1838 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 TDRD15B5MCY1 1934 aaKnown RBP2.13□□□□□ -2.07
XRN1-210ENST00000472697 GBF1Q92538 1859 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 LOC285556D6RIA3 1793 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 RTL9Q8NET4 1388 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 IGHV4-4A0A075B6R2 117 aa2.13□□□□□ -2.07
XRN1-210ENST00000472697 KBTBD11-OT1A0A1B0GTJ5 212 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms