RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PCGF3Q3KNV8 242 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 MMEL1Q495T6 779 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 TMEM154Q6P9G4 183 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 ULK3Q6PHR2 472 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 PXKQ7Z7A4 578 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 ZNF101Q8IZC7 436 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 SCAIQ8N9R8 606 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 OR6S1Q8NH40 331 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 ZNF519Q8TB69 540 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 MGARPQ8TDB4 240 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 CCL17Q92583 94 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 TIMD4Q96H15 378 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 ROPN1BQ9BZX4 212 aaPredicted RBP7.87□□□□□ -1.15
VCL-204ENST00000472585 MS4A7Q9GZW8 240 aaPredicted RBP7.87□□□□□ -1.15
VCL-204ENST00000472585 ROPN1Q9HAT0 212 aaPredicted RBP7.87□□□□□ -1.15
VCL-204ENST00000472585 A4GALTQ9NPC4 353 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 TCF7L2Q9NQB0 619 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 TMEM38BQ9NVV0 291 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 PLEK2Q9NYT0 353 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 GLTPQ9NZD2 209 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 GPR160Q9UJ42 338 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 MMP24Q9Y5R2 645 aa7.87□□□□□ -1.15
VCL-204ENST00000472585 ZSCAN5BA6NJL1 495 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 CLDN25C9JDP6 229 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 CLDN34H7C241 214 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 CLIC1O00299 241 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 PIN1P1O15428 100 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 TPD52L2O43399 206 aaKnown RBP7.86□□□□□ -1.15
VCL-204ENST00000472585 SLC22A3O75751 556 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 MFN2O95140 757 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 SNAP29O95721 258 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 IL6P05231 212 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 PGA4P0DJD7 388 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 PGA3P0DJD8 388 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 ETS2P15036 469 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 AHCYP23526 432 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 PRKAR1BP31321 381 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 MTNR1AP48039 350 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 SELENOVP59797 346 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 KRTAP10-3P60369 221 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 VSNL1P62760 191 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 RBBP4Q09028 425 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 LRRC74AQ0VAA2 488 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 STX3Q13277 289 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 MELKQ14680 651 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 SLC9A3R2Q15599 337 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 ZNF362Q5T0B9 420 aaPredicted RBP7.86□□□□□ -1.15
VCL-204ENST00000472585 SPATA46Q5T0L3 261 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 THEM4Q5T1C6 240 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 FAM91A1Q658Y4 838 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 C16orf87Q6PH81 154 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 DHRS4L2Q6PKH6 230 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 SLC2A7Q6PXP3 512 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 C5orf46Q6UWT4 87 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 SLC35D2Q76EJ3 337 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 KIR3DL3Q8N743 410 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 GLB1L3Q8NCI6 653 aaPredicted RBP7.86□□□□□ -1.15
VCL-204ENST00000472585 OR4K5Q8NGD3 323 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 OR4F5Q8NH21 305 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 OR6X1Q8NH79 312 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 NFKBIDQ8NI38 313 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 ST7LQ8TDW4 575 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 SNX33Q8WV41 574 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 DNAJA4Q8WW22 397 aaPredicted RBP7.86□□□□□ -1.15
VCL-204ENST00000472585 WFDC12Q8WWY7 111 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 RAB1CQ92928 201 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 SLC47A1Q96FL8 570 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 MARS2Q96GW9 593 aaKnown RBP7.86□□□□□ -1.15
VCL-204ENST00000472585 OR52B2Q96RD2 323 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 GAL3ST1Q99999 423 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 TMEM109Q9BVC6 243 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 IKZF5Q9H5V7 419 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 B3GAT2Q9NPZ5 323 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 SLCO1C1Q9NYB5 712 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 RPS6KB2Q9UBS0 482 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 KLHL21Q9UJP4 597 aa7.86□□□□□ -1.15
VCL-204ENST00000472585 LOC100509620A0A075B734 347 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 PPIAL4EA0A075B759 164 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 IGKV1D-43A0A0B4J1Z2 117 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 PPIAL4CA0A0B4J2A2 164 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 PPIAL4DF5H284 164 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 TM9SF1O15321 606 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 DHHO43323 396 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 SPRY3O43610 288 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 AKAP8O43823 692 aaKnown RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 MGRN1O60291 552 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 SNNO75324 88 aaPredicted RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 QDPRP09417 244 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 ADORA3P0DMS8 318 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 PPIAL4FP0DN26 164 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 LSP1P33241 339 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 ZNF154Q13106 437 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 NPTX1Q15818 432 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 HIST3H3Q16695 136 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 HFEQ30201 348 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 PDCD4Q53EL6 469 aaKnown RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 ARSJQ5FYB0 599 aaPredicted RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 TNFAIP8L3Q5GJ75 292 aa7.85□□□□□ -1.15
VCL-204ENST00000472585 RBM45Q8IUH3 476 aaKnown RBP7.85□□□□□ -1.15
VCL-204ENST00000472585 ICA1LQ8NDH6 482 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms