RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 VAPAQ9P0L0 249 aa8.57□□□□□ -1.04
SCAMP3-205ENST00000472397 LEF1Q9UJU2 399 aaPredicted RBP8.57□□□□□ -1.04
SCAMP3-205ENST00000472397 WNK2Q9Y3S1 2297 aa8.57□□□□□ -1.04
SCAMP3-205ENST00000472397 IGKV1D-43A0A0B4J1Z2 117 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 IGHV3-64DA0A0J9YX35 117 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 BLOC1S5-TXNDC5H3BN57 136 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 TRAPPC2LH3BP13 241 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 SHOX2O60902 331 aaPredicted RBP8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 ZNF205O95201 554 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 LYPD3O95274 346 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 ANPEPP15144 967 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 HOXB9P17482 250 aaPredicted RBP8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 WNT5AP41221 380 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 FMODQ06828 376 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 BAMBIQ13145 260 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 SCGB2A2Q13296 93 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 SELPLGQ14242 412 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 SGCAQ16586 387 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 TBC1D28Q2M2D7 210 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 HFEQ30201 348 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 MIDNQ504T8 468 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 RUNDC3AQ59EK9 446 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 KLF17Q5JT82 389 aaPredicted RBP8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 ENTPD8Q5MY95 495 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 PIWIL3Q7Z3Z3 882 aaKnown RBP8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 PXKQ7Z7A4 578 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 RANBP3LQ86VV4 465 aaPredicted RBP8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 KRT73Q86Y46 540 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 ARMC8Q8IUR7 673 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 FUNDC1Q8IVP5 155 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 ADPRHL1Q8NDY3 354 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 GPR32P1Q8NGA4 272 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 OR6T1Q8NGN1 323 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 ZNF519Q8TB69 540 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 RAB1CQ92928 201 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 MCHR2Q969V1 340 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 THOC1Q96FV9 657 aaKnown RBP8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 C1orf147Q96MC9 270 aaPredicted RBP8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 ZNF747Q9BV97 191 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 POFUT1Q9H488 388 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 RAD21L1Q9H4I0 556 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 ZNF385DQ9H6B1 395 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 C12orf10Q9HB07 376 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 NPHS2Q9NP85 383 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 SDR39U1Q9NRG7 319 aaPredicted RBP8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 THAP1Q9NVV9 213 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 TESQ9UGI8 421 aaKnown RBP8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 EGFL7Q9UHF1 273 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 SLC7A7Q9UM01 511 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 TRIM33Q9UPN9 1127 aa8.56□□□□□ -1.04
SCAMP3-205ENST00000472397 IGLV3-9A0A075B6K5 115 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 IQCMA0A1B0GVH7 501 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 C5orf49A4QMS7 147 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 FZD7O75084 574 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 SNNO75324 88 aaPredicted RBP8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 FARS2O95363 451 aaKnown RBP8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 NGFP01138 241 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 HIST1H2ABP04908 130 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 HKR1P10072 659 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 BMP2P12643 396 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 ETS2P15036 469 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 ZNF250P15622 560 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 TNFRSF1BP20333 461 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 FPR2P25090 351 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 APLNRP35414 380 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 LIMS1P48059 325 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 ERVK-25P63136 954 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 TOP3AQ13472 1001 aaPredicted RBP8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 ZNF74Q16587 644 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 DUSP7Q16829 419 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 PDLIM3Q53GG5 364 aaPredicted RBP8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 ARMCX4Q5H9R4 360 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 FAM91A1Q658Y4 838 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 LEG1Q6P5S2 330 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 TTC33Q6PID6 262 aaPredicted RBP8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 C5orf46Q6UWT4 87 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 RBMS3Q6XE24 437 aaKnown RBP8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 RFPL4BQ6ZWI9 263 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 USP43Q70EL4 1123 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 HIST3H2AQ7L7L0 130 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 ZNF627Q7L945 461 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 SNX32Q86XE0 403 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 ZNF101Q8IZC7 436 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 CLDN22Q8N7P3 220 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 OR6X1Q8NH79 312 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 MOSPD2Q8NHP6 518 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 PFN4Q8NHR9 129 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 ABHD4Q8TB40 342 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 DVL3Q92997 716 aaPredicted RBP8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 HIST1H2ACQ93077 130 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 TIMD4Q96H15 378 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 SLC25A44Q96H78 314 aaPredicted RBP8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 MAELQ96JY0 434 aaKnown RBP8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 ARHGDIGQ99819 225 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 EBF4Q9BQW3 602 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 PARD6BQ9BYG5 372 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 OR2J1Q9GZK6 312 aa8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 SSU72Q9NP77 194 aaKnown RBP8.55□□□□□ -1.04
SCAMP3-205ENST00000472397 THUMPD1Q9NXG2 353 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms