RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ASB10Q8WXI3 467 aa8.01□□□□□ -1.13
SMC4-213ENST00000472282 LRTOMTQ8WZ04 291 aa8.01□□□□□ -1.13
SMC4-213ENST00000472282 NEUROG1Q92886 237 aa8.01□□□□□ -1.13
SMC4-213ENST00000472282 Q96MF0 132 aa8.01□□□□□ -1.13
SMC4-213ENST00000472282 OR2M2Q96R28 347 aa8.01□□□□□ -1.13
SMC4-213ENST00000472282 CCL19Q99731 98 aa8.01□□□□□ -1.13
SMC4-213ENST00000472282 TMEM204Q9BSN7 226 aa8.01□□□□□ -1.13
SMC4-213ENST00000472282 ASB6Q9NWX5 421 aa8.01□□□□□ -1.13
SMC4-213ENST00000472282 MALT1Q9UDY8 824 aa8.01□□□□□ -1.13
SMC4-213ENST00000472282 IL20RAQ9UHF4 553 aa8.01□□□□□ -1.13
SMC4-213ENST00000472282 GPR52Q9Y2T5 361 aa8.01□□□□□ -1.13
SMC4-213ENST00000472282 AP4S1Q9Y587 144 aa8.01□□□□□ -1.13
SMC4-213ENST00000472282 VPS13CQ709C8 3753 aa8□□□□□ -1.13
SMC4-213ENST00000472282 TRIM64A6NGJ6 449 aa8□□□□□ -1.13
SMC4-213ENST00000472282 TRIM64BA6NI03 449 aa8□□□□□ -1.13
SMC4-213ENST00000472282 ZNF726A6NNF4 738 aa8□□□□□ -1.13
SMC4-213ENST00000472282 H7C1Q1 480 aa8□□□□□ -1.13
SMC4-213ENST00000472282 PTP4A3O75365 173 aa8□□□□□ -1.13
SMC4-213ENST00000472282 RAD51DO75771 328 aa8□□□□□ -1.13
SMC4-213ENST00000472282 KRT33AO76009 404 aa8□□□□□ -1.13
SMC4-213ENST00000472282 NDUFB2O95178 105 aa8□□□□□ -1.13
SMC4-213ENST00000472282 CNOT4O95628 575 aaKnown RBP8□□□□□ -1.13
SMC4-213ENST00000472282 BCL10O95999 233 aa8□□□□□ -1.13
SMC4-213ENST00000472282 GASTP01350 101 aa8□□□□□ -1.13
SMC4-213ENST00000472282 IGHMP01871 453 aa8□□□□□ -1.13
SMC4-213ENST00000472282 ITGA5P08648 1049 aa8□□□□□ -1.13
SMC4-213ENST00000472282 FCGR1AP12314 374 aa8□□□□□ -1.13
SMC4-213ENST00000472282 PPP3CBP16298 524 aa8□□□□□ -1.13
SMC4-213ENST00000472282 ZNF26P17031 533 aaPredicted RBP8□□□□□ -1.13
SMC4-213ENST00000472282 COX5AP20674 150 aa8□□□□□ -1.13
SMC4-213ENST00000472282 IL32P24001 234 aa8□□□□□ -1.13
SMC4-213ENST00000472282 FASP25445 335 aa8□□□□□ -1.13
SMC4-213ENST00000472282 RPL4P36578 427 aaKnown RBP8□□□□□ -1.13
SMC4-213ENST00000472282 CSNK1A1P48729 337 aa8□□□□□ -1.13
SMC4-213ENST00000472282 DAP3P51398 398 aaKnown RBP8□□□□□ -1.13
SMC4-213ENST00000472282 ITGADQ13349 1161 aa8□□□□□ -1.13
SMC4-213ENST00000472282 TAB1Q15750 504 aa8□□□□□ -1.13
SMC4-213ENST00000472282 SFRP5Q5T4F7 317 aa8□□□□□ -1.13
SMC4-213ENST00000472282 C9orf135Q5VTT2 229 aa8□□□□□ -1.13
SMC4-213ENST00000472282 HMBOX1Q6NT76 420 aa8□□□□□ -1.13
SMC4-213ENST00000472282 ZFP1Q6P2D0 407 aa8□□□□□ -1.13
SMC4-213ENST00000472282 LINGO2Q7L985 606 aa8□□□□□ -1.13
SMC4-213ENST00000472282 AMIGO2Q86SJ2 522 aa8□□□□□ -1.13
SMC4-213ENST00000472282 ZNF433Q8N7K0 673 aaPredicted RBP8□□□□□ -1.13
SMC4-213ENST00000472282 OR6X1Q8NH79 312 aa8□□□□□ -1.13
SMC4-213ENST00000472282 KISS1RQ969F8 398 aaPredicted RBP8□□□□□ -1.13
SMC4-213ENST00000472282 PIGTQ969N2 578 aa8□□□□□ -1.13
SMC4-213ENST00000472282 ADAD1Q96M93 576 aaKnown RBP8□□□□□ -1.13
SMC4-213ENST00000472282 TSPAN32Q96QS1 320 aa8□□□□□ -1.13
SMC4-213ENST00000472282 KATNB1Q9BVA0 655 aa8□□□□□ -1.13
SMC4-213ENST00000472282 LINC00470Q9BZP3 86 aa8□□□□□ -1.13
SMC4-213ENST00000472282 NDEL1Q9GZM8 345 aa8□□□□□ -1.13
SMC4-213ENST00000472282 OR52D1Q9H346 318 aa8□□□□□ -1.13
SMC4-213ENST00000472282 TXNIPQ9H3M7 391 aa8□□□□□ -1.13
SMC4-213ENST00000472282 NTN4Q9HB63 628 aa8□□□□□ -1.13
SMC4-213ENST00000472282 PDP1Q9P0J1 537 aaPredicted RBP8□□□□□ -1.13
SMC4-213ENST00000472282 ADAM18Q9Y3Q7 739 aa8□□□□□ -1.13
SMC4-213ENST00000472282 CADP27708 2225 aa8□□□□□ -1.13
SMC4-213ENST00000472282 USF3Q68DE3 2245 aa8□□□□□ -1.13
SMC4-213ENST00000472282 YLPM1P49750 1951 aaKnown RBP8□□□□□ -1.13
SMC4-213ENST00000472282 SETD2Q9BYW2 2564 aaPredicted RBP7.99□□□□□ -1.13
SMC4-213ENST00000472282 LOC100289279A0A1B0GTE1 492 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 ARRDC5A6NEK1 342 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 NPIPB13A6NJU9 1138 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 OR6C65A6NJZ3 312 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 NPIPB4C9JG80 1138 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 ZNF587BE7ETH6 402 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 H3BNX3 289 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 M0R3G1 203 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 PDLIM1O00151 329 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 ENTPD5O75356 428 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 SOX14O95416 240 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 PPP1R3DO95685 299 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 LY6G6DO95868 133 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 IGHG1P01857 330 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 CD14P08571 375 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 PGA4P0DJD7 388 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 PGA3P0DJD8 388 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 CDH2P19022 906 aaPredicted RBP7.99□□□□□ -1.13
SMC4-213ENST00000472282 PTH2RP49190 550 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 RPL27P61353 136 aaKnown RBP7.99□□□□□ -1.13
SMC4-213ENST00000472282 ERVK-25P63136 954 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 ROR2Q01974 943 aaKnown RBP7.99□□□□□ -1.13
SMC4-213ENST00000472282 RUNX1T1Q06455 604 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 P2RY6Q15077 328 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 TAF11Q15544 211 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 CEACAM16Q2WEN9 425 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 KRTAP21-3Q3LHN1 58 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 PHYHD1Q5SRE7 291 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 ARMC4Q5T2S8 1044 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 SHQ1Q6PI26 577 aaKnown RBP7.99□□□□□ -1.13
SMC4-213ENST00000472282 SMARCD3Q6STE5 483 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 ZNF620Q6ZNG0 422 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 BHLHA15Q7RTS1 189 aaPredicted RBP7.99□□□□□ -1.13
SMC4-213ENST00000472282 HDDC2Q7Z4H3 204 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 ABHD12BQ7Z5M8 362 aaPredicted RBP7.99□□□□□ -1.13
SMC4-213ENST00000472282 BIVMQ86UB2 503 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 C20orf196Q8IYI0 205 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 GPR137CQ8N3F9 429 aa7.99□□□□□ -1.13
SMC4-213ENST00000472282 NOXO1Q8NFA2 376 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms