RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 HMGB2P26583 209 aaKnown RBP0.63□□□□□ -2.31
COMMD3-209ENST00000471350 HSD17B2P37059 387 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 AQP2P41181 271 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 NPBWR2P48146 333 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 KRTAP12-1P59990 96 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 GMFBP60983 142 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 RBX1P62877 108 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 IL1RL1Q01638 556 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 PDZK1IP1Q13113 114 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 RGNQ15493 299 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 CEBPEQ15744 281 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 SNRNP35Q16560 246 aaKnown RBP0.63□□□□□ -2.31
COMMD3-209ENST00000471350 KCTD21Q4G0X4 260 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 RAB12Q6IQ22 244 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 ARL9Q6T311 187 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 CCDC80Q76M96 950 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 SNX20Q7Z614 316 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 TMEM135Q86UB9 458 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 NT5DC3Q86UY8 548 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 NUDCD3Q8IVD9 361 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 ZNF683Q8IZ20 524 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 CENPLQ8N0S6 344 aaPredicted RBP0.63□□□□□ -2.31
COMMD3-209ENST00000471350 OR52H1Q8NGJ2 320 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 OR1F12Q8NHA8 337 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 UBE2E3Q969T4 207 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 FAM3DQ96BQ1 224 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 OXGR1Q96P68 337 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 LZTS2Q9BRK4 669 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 ADAP2Q9NPF8 381 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 PCSK1NQ9UHG2 260 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 LAMP5Q9UJQ1 280 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 OR10H1Q9Y4A9 318 aa0.63□□□□□ -2.31
COMMD3-209ENST00000471350 NUP214P35658 2090 aaPredicted RBP0.63□□□□□ -2.31
COMMD3-209ENST00000471350 PHF3Q92576 2039 aaKnown RBP0.62□□□□□ -2.31
COMMD3-209ENST00000471350 SEC16AO15027 2179 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 HIDE1A8MVS5 230 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 CHADO15335 359 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 IGLV2-8P01709 118 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 HLA-DQB1P01920 261 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 SERPINB5P36952 375 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 OGDHQ02218 1023 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 AP1B1Q10567 949 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 GANABQ14697 944 aaKnown RBP0.62□□□□□ -2.31
COMMD3-209ENST00000471350 ORMDL2Q53FV1 153 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 TMEM41BQ5BJD5 291 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 DMRTC1Q5HYR2 192 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 C10orf120Q5SQS8 335 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 C1orf220Q5T0J3 134 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 CEMP1Q6PRD7 247 aaPredicted RBP0.62□□□□□ -2.31
COMMD3-209ENST00000471350 TEX43Q6ZNM6 134 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 ASCL5Q7RTU5 278 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 LHFPL3Q86UP9 236 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 PIANPQ8IYJ0 282 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 SLC38A6Q8IZM9 456 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 TMEM256Q8N2U0 113 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 MRPL43Q8N983 215 aaKnown RBP0.62□□□□□ -2.31
COMMD3-209ENST00000471350 CMTM2Q8TAZ6 248 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 KLF14Q8TD94 323 aaPredicted RBP0.62□□□□□ -2.31
COMMD3-209ENST00000471350 TMEM159Q96B96 161 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 TTC25Q96NG3 672 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 FAM111AQ96PZ2 611 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 P2RX4Q99571 388 aa0.62□□□□□ -2.31
COMMD3-209ENST00000471350 SAV1Q9H4B6 383 aaPredicted RBP0.62□□□□□ -2.31
COMMD3-209ENST00000471350 SF3B1O75533 1304 aaKnown RBP eCLIP0.62□□□□□ -2.313e-6■■■■■ 44.6
COMMD3-209ENST00000471350 FRMPD3Q5JV73 1810 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 AHDC1Q5TGY3 1603 aaPredicted RBP0.61□□□□□ -2.31
COMMD3-209ENST00000471350 BTNL10A8MVZ5 291 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 BTN3A3O00478 584 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 HSD17B6O14756 317 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 MAPK13O15264 365 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 CHST10O43529 356 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 ERLIN2O94905 339 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 DIRAS1O95057 198 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 KLHL2O95198 593 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 FGF1P05230 155 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 ASGR1P07306 291 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 IL10P22301 178 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 PSMB5P28074 263 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 QARSP47897 775 aaKnown RBP0.61□□□□□ -2.31
COMMD3-209ENST00000471350 KLHL38Q2WGJ6 581 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 DEFB134Q4QY38 66 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 PHYHD1Q5SRE7 291 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 TRIM40Q6P9F5 258 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 ADM2Q7Z4H4 148 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 ECHDC2Q86YB7 292 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 WDFY1Q8IWB7 410 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 HDDC3Q8N4P3 179 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 ZNF557Q8N988 423 aaPredicted RBP0.61□□□□□ -2.31
COMMD3-209ENST00000471350 OR4D5Q8NGN0 318 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 CIRBP-AS1Q8TBR5 109 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 NTAN1Q96AB6 310 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 SORT1Q99523 831 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 TIMM17AQ99595 171 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 RPF2Q9H7B2 306 aaKnown RBP0.61□□□□□ -2.31
COMMD3-209ENST00000471350 ELOVL3Q9HB03 270 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 EXOSC4Q9NPD3 245 aaKnown RBP0.61□□□□□ -2.31
COMMD3-209ENST00000471350 KCNIP3Q9Y2W7 256 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 ATP6V0A2Q9Y487 856 aa0.61□□□□□ -2.31
COMMD3-209ENST00000471350 MRPS18BQ9Y676 258 aaKnown RBP0.61□□□□□ -2.31
COMMD3-209ENST00000471350 KMT2BQ9UMN6 2715 aaPredicted RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms