RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 CPPED1Q9BRF8 314 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 LMAN1LQ9HAT1 526 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 SEMA4GQ9NTN9 838 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 PTTG3PQ9NZH4 202 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 INTS6Q9UL03 887 aaKnown RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 SIPA1L3O60292 1781 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 FAM208AQ9UK61 1670 aaKnown RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 NME1P15531 152 aaKnown RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 GCSHP23434 173 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 OR1D4P47884 311 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ERHP84090 104 aaKnown RBP6.38□□□□□ -1.39
BRCA1-210ENST00000471181 HBMQ6B0K9 141 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 BLOC1S3Q6QNY0 202 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 DRAM2Q6UX65 266 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 PLXDC2Q6UX71 529 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 RETREG3Q86VR2 466 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 ARHGEF39Q8N4T4 335 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 C1orf74Q96LT6 269 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 PKMYT1Q99640 499 aa6.38□□□□□ -1.39
BRCA1-210ENST00000471181 A0A087WV62 115 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 RNASET2O00584 256 aaKnown RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 DEDDO75618 318 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 NEURL1O76050 574 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 GLCEO94923 617 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 GYPAP02724 150 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 CCKARP32238 428 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 BMI1P35226 326 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 SELENOWP63302 87 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 CYP1B1Q16678 543 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ALKBH6Q3KRA9 238 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 TIFABQ6ZNK6 161 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 LGI3Q8N145 548 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 TMEM18Q96B42 140 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 TMIGD2Q96BF3 282 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 SLC22A11Q9NSA0 550 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 MN1Q10571 1320 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 CER1O95813 267 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ABCD3P28288 659 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 UQCRFS1P47985 274 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 MNX1P50219 401 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 CNN1P51911 297 aaKnown RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 MAT1AQ00266 395 aaKnown RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ENDOGQ14249 297 aaKnown RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 DUSP6Q16828 381 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF528Q3MIS6 628 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 DCAF12Q5T6F0 453 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 MANEALQ5VSG8 457 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 OPN5Q6U736 354 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 TOMM20LQ6UXN7 152 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 NAXDQ8IW45 347 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ZADH2Q8N4Q0 377 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 OR52B6Q8NGF0 335 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 SLC35B2Q8TB61 432 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ATOH1Q92858 354 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 TECTBQ96PL2 329 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 CENPOQ9BU64 300 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 TEX264Q9Y6I9 313 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 TMEM221A6NGB7 291 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 AIFM1O95831 613 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 IGHV3-9P01782 118 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 HTN1P15515 57 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 NAGAP17050 411 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 MAP2K6P52564 334 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 CLDN2P57739 230 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 PGGHGQ32M88 737 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 SLC35E4Q6ICL7 350 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 GRINAQ7Z429 371 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ARL6IP6Q8N6S5 226 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 LINC00469Q8N7U9 141 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 NPEPL1Q8NDH3 523 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 KCNG3Q8TAE7 436 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ISG20Q96AZ6 181 aaKnown RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 GPR78Q96P69 363 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 OR4C12Q96R67 309 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 RTL8AQ9BWD3 113 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ZMAT3Q9HA38 289 aaKnown RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ANKRD10Q9NXR5 420 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 OR52A4PA6NMU1 304 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 TMX2-CTNND1H3BSU7 103 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 SIGLEC6O43699 453 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 SLC25A4P12235 298 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 DUSP1P28562 367 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 PBX1P40424 430 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ERVFC1-1P60608 527 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 SH3BP2P78314 561 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 REEP5Q00765 189 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ADIPOQQ15848 244 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 TCTN1Q2MV58 587 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF787Q6DD87 383 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 RPL22L1Q6P5R6 122 aaKnown RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF534Q76KX8 674 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 PPP1R3BQ86XI6 285 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 WFDC8Q8IUA0 241 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 IGDCC3Q8IVU1 814 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 MTMR14Q8NCE2 650 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 GOT1L1Q8NHS2 421 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 TSLPQ969D9 159 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 LCORQ96JN0 433 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-210ENST00000471181 NTMT1Q9BV86 223 aa6.37□□□□□ -1.39
BRCA1-210ENST00000471181 GORASP2Q9H8Y8 452 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms