RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 NCR1O76036 304 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 IGF2P01344 180 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 ZNF250P15622 560 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 RAD52P43351 418 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 DAP3P51398 398 aaKnown RBP14.97□□□□□ -0.01
COL7A1-208ENST00000470076 RPL18Q07020 188 aaKnown RBP14.97□□□□□ -0.01
COL7A1-208ENST00000470076 MMEL1Q495T6 779 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 CARM1Q86X55 608 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 PAQR4Q8N4S7 273 aaPredicted RBP14.97□□□□□ -0.01
COL7A1-208ENST00000470076 NOXO1Q8NFA2 376 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 ZNF519Q8TB69 540 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 SYNPRQ8TBG9 265 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 SNX33Q8WV41 574 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 C11orf40Q8WZ69 217 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 YIPF5Q969M3 257 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 ZNF347Q96SE7 839 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 BCL2L14Q9BZR8 327 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 SLCO1C1Q9NYB5 712 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 TAAR3PQ9P1P4 343 aa14.97□□□□□ -0.01
COL7A1-208ENST00000470076 STX18Q9P2W9 335 aaKnown RBP14.97□□□□□ -0.01
COL7A1-208ENST00000470076 C17orf100A8MU93 164 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 FBP2O00757 339 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 PPIHO43447 177 aaKnown RBP14.96□□□□□ -0.01
COL7A1-208ENST00000470076 RP2O75695 350 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 OR7A10O76100 309 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 OR5F1O95221 314 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 CLPTM1O96005 669 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 F13BP05160 661 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 LCKP06239 509 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 CCL2P13500 99 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 ACADSP16219 412 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 FUT1P19526 365 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 ZNF133P52736 654 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-208ENST00000470076 UGT2B15P54855 530 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 TAS2R41P59536 307 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 RUNX1T1Q06455 604 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 PCGF3Q3KNV8 242 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 TMEM154Q6P9G4 183 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 RINLQ6ZS11 566 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 SYT14Q8NB59 555 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 RBM15BQ8NDT2 890 aaKnown RBP14.96□□□□□ -0.01
COL7A1-208ENST00000470076 OR8J3Q8NGG0 315 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 LIPHQ8WWY8 451 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 ASB10Q8WXI3 467 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 TMEM186Q96B77 213 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 ECSITQ9BQ95 431 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 NARFLQ9H6Q4 476 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 HINT3Q9NQE9 182 aaKnown RBP14.96□□□□□ -0.01
COL7A1-208ENST00000470076 INIPQ9NRY2 104 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 MRGBPQ9NV56 204 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 METRNQ9UJH8 293 aa14.96□□□□□ -0.01
COL7A1-208ENST00000470076 NPIPB13A6NJU9 1138 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 NPIPB4C9JG80 1138 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 HAX1O00165 279 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 TRMUO75648 421 aaKnown RBP14.95□□□□□ -0.02
COL7A1-208ENST00000470076 NPPAP01160 153 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 MSMBP08118 114 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 MMP7P09237 267 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-208ENST00000470076 MAGEB1P43366 347 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 UCP2P55851 309 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 MYBPC1Q00872 1141 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 MOGQ16653 247 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 ALKBH6Q3KRA9 238 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 RABL3Q5HYI8 236 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 C10orf128Q5T292 105 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 ERICH5Q6P6B1 374 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 DEF8Q6ZN54 512 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 HDXQ7Z353 690 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 CALHM3Q86XJ0 350 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 NKAIN4Q8IVV8 208 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 PFN4Q8NHR9 129 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 TMEM255BQ8WV15 326 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 TMEM239Q8WW34 195 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 LRRC58Q96CX6 371 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 SGTBQ96EQ0 304 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 KCNN2Q9H2S1 579 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 OR51B6Q9H340 312 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 SIAEQ9HAT2 523 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 SMURF2Q9HAU4 748 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 HIF1ANQ9NWT6 349 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 NKIRAS2Q9NYR9 191 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 TREM2Q9NZC2 230 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 RIMS3Q9UJD0 308 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 GRIP1Q9Y3R0 1128 aa14.95□□□□□ -0.02
COL7A1-208ENST00000470076 FAM157AC9JC47 383 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 WNT9BO14905 357 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 IFNA14P01570 189 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 MT-ND5P03915 603 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 TSPAN19P0C672 248 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 GAAP10253 952 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 THRBP10828 461 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 NR2C1P13056 603 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 ITGA2P17301 1181 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 APLNRP35414 380 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 AQP2P41181 271 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 LMO4P61968 165 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 MRPS34P82930 218 aaKnown RBP14.94□□□□□ -0.02
COL7A1-208ENST00000470076 HSF2Q03933 536 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 SCGB2A2Q13296 93 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 COQ5Q5HYK3 327 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms