RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 C9J4A7 227 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SCAMP2O15127 329 aaKnown RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 CTNSO60931 367 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 MOSPD3O75425 235 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ADAP1O75689 374 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 JTBO76095 146 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF432O94892 652 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 FARS2O95363 451 aaKnown RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 OR2C1O95371 312 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 IGF2P01344 180 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TRBC1P01850 177 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TK1P04183 234 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 GAPDHP04406 335 aaKnown RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 CTSLP07711 333 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 FCGR3AP08637 254 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ANKRD34CP0C6C1 535 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 NR2C1P13056 603 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ANK1P16157 1881 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 PNLIPP16233 465 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF7P17097 686 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ACHEP22303 614 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 CXCR1P25024 350 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ELAVL4P26378 380 aaKnown RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ITPKBP27987 946 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 CHATP28329 748 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TACR3P29371 465 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 AVPR2P30518 371 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SULT1A1P50225 295 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SULT1A2P50226 295 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 HTR6P50406 440 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TDGF1P3P51864 188 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 UCP2P55851 309 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 CAV3P56539 151 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 YBEYP58557 167 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TAS2R31P59538 309 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 STXBP1P61764 594 aaKnown RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 MRPS11P82912 194 aaKnown RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 BEX3Q00994 111 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 PRKCZQ05513 592 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 LAMTOR4Q0VGL1 99 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TSPAN31Q12999 210 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 OLIG2Q13516 323 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 GAMTQ14353 236 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 MEF2DQ14814 521 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SURF2Q15527 256 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SLC5A12Q1EHB4 618 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 LINC00303Q3SY05 128 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF311Q5JNZ3 666 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM69Q5SWH9 247 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 COL5A1-AS1Q5SY13 56 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 OR2G6Q5TZ20 316 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 PRAMEF8Q5VWM4 474 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 PRAMEF7Q5VXH5 474 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SFRP4Q6FHJ7 346 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ACSM5Q6NUN0 579 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 RPUSD3Q6P087 351 aaKnown RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 RSPO2Q6UXX9 243 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TMIGD1Q6UXZ0 262 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 LBX2Q6XYB7 198 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 LANCL3Q6ZV70 420 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TAS1R1Q7RTX1 841 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 COMMD6Q7Z4G1 85 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 CEACAM19Q7Z692 300 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TSEN54Q7Z6J9 526 aaKnown RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TAF8Q7Z7C8 310 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ACOT1Q86TX2 421 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 MOGAT3Q86VF5 341 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 NUDT13Q86X67 352 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 APCDD1Q8J025 514 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 HIST3H2BBQ8N257 126 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SYS1Q8N2H4 156 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 KRTCAP2Q8N6L1 136 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 NPWQ8N729 165 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 OR8G5Q8NG78 346 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 OR4K17Q8NGC6 315 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 OR6T1Q8NGN1 323 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 OR9A2Q8NGT5 310 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 CD200R1Q8TD46 325 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ADAMTS17Q8TE56 1095 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 FAM216AQ8WUB2 273 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SPRYD4Q8WW59 207 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 KCNE4Q8WWG9 221 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 HPSE2Q8WWQ2 592 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ASB17Q8WXJ9 295 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 MIB2Q96AX9 1013 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 PPCDCQ96CD2 204 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ACY3Q96HD9 319 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 FCRL2Q96LA5 508 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SCGB3A2Q96PL1 93 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TAAR1Q96RJ0 339 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SLC22A12Q96S37 553 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 DMRTA2Q96SC8 542 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 PHB2Q99623 299 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 COPS8Q99627 209 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 GPR21Q99679 349 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 NAA11Q9BSU3 229 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM208Q9BTX3 173 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 FNDC11Q9BVV2 318 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 BOCQ9BWV1 1114 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ANGPTL4Q9BY76 406 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms