RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 PYDC2Q56P42 97 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 IDNKQ5T6J7 187 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 SLC22A10Q63ZE4 541 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 PYHIN1Q6K0P9 492 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 JMJD6Q6NYC1 403 aaPredicted RBP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 FAM199XQ6PEV8 388 aaPredicted RBP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 ASB18Q6ZVZ8 466 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 SLC35D2Q76EJ3 337 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 DPY19L4Q7Z388 723 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 RDH10Q8IZV5 341 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 Q8N402 240 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 YIPF7Q8N8F6 280 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 IL17RDQ8NFM7 739 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 SLC26A10Q8NG04 563 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 OR4K17Q8NGC6 315 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 OR6X1Q8NH79 312 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 OR5AK2Q8NH90 309 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 GPR148Q8TDV2 347 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 SMAP2Q8WU79 429 aaPredicted RBP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 C15orf40Q8WUR7 153 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 MCHR2Q969V1 340 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 MIB2Q96AX9 1013 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 ARL5BQ96KC2 179 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 C4orf45Q96LM5 186 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 OXGR1Q96P68 337 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 PDCD1LG2Q9BQ51 273 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 USB1Q9BQ65 265 aaKnown RBP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 COMMD4Q9H0A8 199 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 SLITRK2Q9H156 845 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 ZNF275Q9NSD4 429 aaPredicted RBP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 C14orf119Q9NWQ9 140 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 MRPL22Q9NWU5 206 aaKnown RBP6.83□□□□□ -1.32
COL6A3-208ENST00000468792 B3GAT1Q9P2W7 334 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 TCFL5Q9UL49 500 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 NPIPA1Q9UND3 350 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 RASD1Q9Y272 281 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 KLHDC2Q9Y2U9 406 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 LOXL2Q9Y4K0 774 aa6.83□□□□□ -1.32
COL6A3-208ENST00000468792 A0A0C4DFX4 3053 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 AQP7P3A6NL99 342 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 IFITM5A6NNB3 132 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 CDX4O14627 284 aaPredicted RBP6.82□□□□□ -1.32
COL6A3-208ENST00000468792 DVL2O14641 736 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 PIN1P1O15428 100 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 SULT1B1O43704 296 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 GSTZ1O43708 216 aaPredicted RBP6.82□□□□□ -1.32
COL6A3-208ENST00000468792 CBR3O75828 277 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 NCR1O76036 304 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 UBL3O95164 117 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 ISG15P05161 165 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 SERPINA7P05543 415 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 OR8G3PP0DMU2 310 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 IFNGR1P15260 489 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 ELK1P19419 428 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 RANBP1P43487 201 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 PITPNBP48739 271 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 MMP15P51511 669 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 ZNF133P52736 654 aaPredicted RBP6.82□□□□□ -1.32
COL6A3-208ENST00000468792 SF3A2Q15428 464 aaKnown RBP6.82□□□□□ -1.32
COL6A3-208ENST00000468792 KCNMB1Q16558 191 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 HIST3H3Q16695 136 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 FAM27D1Q5T7N8 215 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 BICRALQ6AI39 1079 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 TIGD3Q6B0B8 471 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 OR5M10Q6IEU7 315 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 MZT2BQ6NZ67 158 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 POMZP3Q6PJE2 187 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 LYPD4Q6UWN0 246 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 LRRN1Q6UXK5 716 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 TMPPEQ6ZT21 453 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 RAB11FIP2Q7L804 512 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 PPP1R32Q7Z5V6 425 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 NRARPQ7Z6K4 114 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 CDH24Q86UP0 819 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 GLB1L2Q8IW92 636 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 ESX1Q8N693 406 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 C19orf18Q8NEA5 215 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 OR6N2Q8NGY6 317 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 OR52N5Q8NH56 324 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 TRMT10AQ8TBZ6 339 aaKnown RBP6.82□□□□□ -1.32
COL6A3-208ENST00000468792 DEDD2Q8WXF8 326 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 RAB40AQ8WXH6 277 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 RGP1Q92546 391 aaPredicted RBP6.82□□□□□ -1.32
COL6A3-208ENST00000468792 NSMAFQ92636 917 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 WNT2BQ93097 391 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 SLC25A44Q96H78 314 aaPredicted RBP6.82□□□□□ -1.32
COL6A3-208ENST00000468792 RBP7Q96R05 134 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 OR14A2Q96R54 314 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 ABCG5Q9H222 651 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 PROK2Q9HC23 129 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 NOX4Q9NPH5 578 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 TIGARQ9NQ88 270 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 POLE4Q9NR33 117 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 RBFOX1Q9NWB1 397 aaKnown RBP6.82□□□□□ -1.32
COL6A3-208ENST00000468792 RHBDL2Q9NX52 303 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 TEKT2Q9UIF3 430 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 CAMK2AQ9UQM7 478 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 VDAC3Q9Y277 283 aa6.82□□□□□ -1.32
COL6A3-208ENST00000468792 FARSAQ9Y285 508 aaKnown RBP6.82□□□□□ -1.32
COL6A3-208ENST00000468792 ETV7Q9Y603 341 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms