RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 ZNF806P0C7X5 589 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 RORAP35398 523 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 FUSP35637 526 aaKnown RBP eCLIP0.81□□□□□ -2.28
SSB-208ENST00000468600 NUCB2P80303 420 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 PHYHD1Q5SRE7 291 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 TEX43Q6ZNM6 134 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 ASCL5Q7RTU5 278 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 VSTM4Q8IW00 320 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 OR4D5Q8NGN0 318 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 PYROXD1Q8WU10 500 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 C1orf198Q9H425 327 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 PCSK1NQ9UHG2 260 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 ENOPH1Q9UHY7 261 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 KIAA1257Q9ULG3 409 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 CBY1Q9Y3M2 126 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 NACADO15069 1562 aa0.81□□□□□ -2.28
SSB-208ENST00000468600 COL22A1Q8NFW1 1626 aaPredicted RBP0.81□□□□□ -2.28
SSB-208ENST00000468600 IGHV1OR15-9A0A0B4J2B8 117 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 FGF1P05230 155 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 UBTFL6P0CB48 400 aaPredicted RBP0.8□□□□□ -2.28
SSB-208ENST00000468600 OGDHQ02218 1023 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 TCP10Q12799 353 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 KLRB1Q12918 225 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 MAB21L1Q13394 359 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 TATDN3Q17R31 274 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 TMEM41BQ5BJD5 291 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 FAM222AQ5U5X8 452 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 KCNIP4Q6PIL6 250 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 ARL9Q6T311 187 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 C16orf47Q6ZP98 133 aaPredicted RBP0.8□□□□□ -2.28
SSB-208ENST00000468600 USP50Q70EL3 339 aaPredicted RBP0.8□□□□□ -2.28
SSB-208ENST00000468600 SLC16A13Q7RTY0 426 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 LHFPL3Q86UP9 236 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 PRSS58Q8IYP2 241 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 SLC38A6Q8IZM9 456 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 CEP112Q8N8E3 955 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 MSANTD4Q8NCY6 345 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 FAIM2Q9BWQ8 316 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 ADAP2Q9NPF8 381 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 IKBKGQ9Y6K9 419 aa0.8□□□□□ -2.28
SSB-208ENST00000468600 RNF103-CHMP3A0A140T963 221 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 H0YJW9 148 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 PRKAB2O43741 272 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 ATP5LO75964 103 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 DTYMKP23919 212 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 HRH1P35367 487 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 OPRD1P41143 372 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 UGT2B15P54855 530 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 AP1B1Q10567 949 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 RGNQ15493 299 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 DPYSL2Q16555 572 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 DNAJC24Q6P3W2 148 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 TMEM135Q86UB9 458 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 ZNF557Q8N988 423 aaPredicted RBP0.79□□□□□ -2.28
SSB-208ENST00000468600 OR2L3Q8NG85 312 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 C4orf36Q96KX1 117 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 FAM111AQ96PZ2 611 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 UVRAGQ9P2Y5 699 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 HOOK1Q9UJC3 728 aaKnown RBP0.79□□□□□ -2.28
SSB-208ENST00000468600 LAMP5Q9UJQ1 280 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 RAB23Q9ULC3 237 aa0.79□□□□□ -2.28
SSB-208ENST00000468600 CACNA1GO43497 2377 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 HIDE1A8MVS5 230 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 POLR1CO15160 346 aaPredicted RBP0.78□□□□□ -2.28
SSB-208ENST00000468600 TM7SF2O76062 418 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 UTS2O95399 124 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 PTBP3O95758 552 aaKnown RBP0.78□□□□□ -2.28
SSB-208ENST00000468600 ARF4P18085 180 aaPredicted RBP0.78□□□□□ -2.28
SSB-208ENST00000468600 CYP2F1P24903 491 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 CEACAM6P40199 344 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 RFX3P48380 749 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 FAM53BQ14153 422 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 KCTD21Q4G0X4 260 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 OR2A2Q6IF42 318 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 GUSBP11Q6P575 273 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 CDKL3Q8IVW4 592 aaPredicted RBP0.78□□□□□ -2.28
SSB-208ENST00000468600 HDDC3Q8N4P3 179 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 SLC35G3Q8N808 338 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 MAIP1Q8WWC4 291 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 SHC3Q92529 594 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 HGDQ93099 445 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 IP6K3Q96PC2 410 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 CLCC1Q96S66 551 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 PKMYT1Q99640 499 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 HSD3B7Q9H2F3 369 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 ELOVL3Q9HB03 270 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 RPH3ALQ9UNE2 315 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 POLDIP2Q9Y2S7 368 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 KCNIP3Q9Y2W7 256 aa0.78□□□□□ -2.28
SSB-208ENST00000468600 MRPS18BQ9Y676 258 aaKnown RBP0.78□□□□□ -2.28
SSB-208ENST00000468600 BTNL10A8MVZ5 291 aa0.77□□□□□ -2.29
SSB-208ENST00000468600 MFN2O95140 757 aa0.77□□□□□ -2.29
SSB-208ENST00000468600 IGHV2-5P01817 119 aa0.77□□□□□ -2.29
SSB-208ENST00000468600 HLA-DQB1P01920 261 aa0.77□□□□□ -2.29
SSB-208ENST00000468600 CT62P0C5K7 136 aa0.77□□□□□ -2.29
SSB-208ENST00000468600 GNA11P29992 359 aa0.77□□□□□ -2.29
SSB-208ENST00000468600 RDXP35241 583 aaKnown RBP0.77□□□□□ -2.29
SSB-208ENST00000468600 SERPINB5P36952 375 aa0.77□□□□□ -2.29
SSB-208ENST00000468600 FDFT1P37268 417 aa0.77□□□□□ -2.29
SSB-208ENST00000468600 RPL13AP40429 203 aaKnown RBP0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms