RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TAAR3PQ9P1P4 343 aa20.95■□□□□ 0.94
PTCH1-210ENST00000468211 RIMS3Q9UJD0 308 aa20.95■□□□□ 0.94
PTCH1-210ENST00000468211 RP2O75695 350 aa20.94■□□□□ 0.94
PTCH1-210ENST00000468211 MMP7P09237 267 aaPredicted RBP20.94■□□□□ 0.94
PTCH1-210ENST00000468211 ACADSP16219 412 aa20.94■□□□□ 0.94
PTCH1-210ENST00000468211 DVL1P1P54792 670 aaPredicted RBP20.94■□□□□ 0.94
PTCH1-210ENST00000468211 TAS2R41P59536 307 aa20.94■□□□□ 0.94
PTCH1-210ENST00000468211 SGTBQ96EQ0 304 aa20.94■□□□□ 0.94
PTCH1-210ENST00000468211 ECSITQ9BQ95 431 aa20.94■□□□□ 0.94
PTCH1-210ENST00000468211 IGLV3-9A0A075B6K5 115 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 IGKV1D-43A0A0B4J1Z2 117 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 A0A1W2PRG6 482 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 MCIDASD6RGH6 385 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 SASH3O75995 380 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 SLC2A10O95528 541 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 TSPAN19P0C672 248 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 ZNF250P15622 560 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 FUT4P22083 530 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 CDAP32320 146 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 RBM34P42696 430 aaKnown RBP20.93■□□□□ 0.94
PTCH1-210ENST00000468211 ZNF133P52736 654 aaPredicted RBP20.93■□□□□ 0.94
PTCH1-210ENST00000468211 LAPTM4AQ15012 233 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 SLC36A2Q495M3 483 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 ARMC4Q5T2S8 1044 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 REP15Q6BDI9 236 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 RINLQ6ZS11 566 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 RBM15BQ8NDT2 890 aaKnown RBP20.93■□□□□ 0.94
PTCH1-210ENST00000468211 CPEB3Q8NE35 698 aaKnown RBP20.93■□□□□ 0.94
PTCH1-210ENST00000468211 OR8J3Q8NGG0 315 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 TMEM239Q8WW34 195 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 GTF3AQ92664 365 aaKnown RBP20.93■□□□□ 0.94
PTCH1-210ENST00000468211 NMD3Q96D46 503 aaKnown RBP20.93■□□□□ 0.94
PTCH1-210ENST00000468211 INIPQ9NRY2 104 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 TREM2Q9NZC2 230 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 BAG5Q9UL15 447 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 ZNF346Q9UL40 294 aaKnown RBP20.93■□□□□ 0.94
PTCH1-210ENST00000468211 UGT2A1Q9Y4X1 527 aa20.93■□□□□ 0.94
PTCH1-210ENST00000468211 PIP5K1CO60331 668 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 ENTPD5O75356 428 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 OR5F1O95221 314 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 SNAP29O95721 258 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 LCKP06239 509 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 SAGP10523 405 aaPredicted RBP20.92■□□□□ 0.94
PTCH1-210ENST00000468211 H2AFXP16104 143 aaPredicted RBP20.92■□□□□ 0.94
PTCH1-210ENST00000468211 SRP14P37108 136 aaKnown RBP20.92■□□□□ 0.94
PTCH1-210ENST00000468211 ZNF84P51523 738 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 UCP2P55851 309 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 FMODQ06828 376 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 KLF10Q13118 480 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 NKPD1Q17RQ9 610 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 NRN1LQ496H8 165 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 C10orf128Q5T292 105 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 CGB2Q6NT52 195 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 SYNPRQ8TBG9 265 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 C10orf82Q8WW14 230 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 LIPHQ8WWY8 451 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 HDAC2Q92769 488 aaKnown RBP20.92■□□□□ 0.94
PTCH1-210ENST00000468211 SH3GL1Q99961 368 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 LPAR2Q9HBW0 351 aa20.92■□□□□ 0.94
PTCH1-210ENST00000468211 SLC22A23A1A5C7 686 aa20.91■□□□□ 0.94
PTCH1-210ENST00000468211 C17orf100A8MU93 164 aa20.91■□□□□ 0.94
PTCH1-210ENST00000468211 B4DSR2 109 aa20.91■□□□□ 0.94
PTCH1-210ENST00000468211 MRASO14807 208 aa20.91■□□□□ 0.94
PTCH1-210ENST00000468211 PPIHO43447 177 aaKnown RBP20.91■□□□□ 0.94
PTCH1-210ENST00000468211 CDC14BO60729 498 aa20.91■□□□□ 0.94
PTCH1-210ENST00000468211 TMEM33P57088 247 aa20.91■□□□□ 0.94
PTCH1-210ENST00000468211 KLF3P57682 345 aaPredicted RBP20.91■□□□□ 0.94
PTCH1-210ENST00000468211 MRPS11P82912 194 aaKnown RBP20.91■□□□□ 0.94
PTCH1-210ENST00000468211 TBC1D28Q2M2D7 210 aa20.91■□□□□ 0.94
PTCH1-210ENST00000468211 CYBRD1Q53TN4 286 aa20.91■□□□□ 0.94
PTCH1-210ENST00000468211 DPPA2Q7Z7J5 298 aa20.91■□□□□ 0.94
PTCH1-210ENST00000468211 ZNF519Q8TB69 540 aa20.91■□□□□ 0.94
PTCH1-210ENST00000468211 NABP1Q96AH0 204 aa20.91■□□□□ 0.94
PTCH1-210ENST00000468211 HINT3Q9NQE9 182 aaKnown RBP20.91■□□□□ 0.94
PTCH1-210ENST00000468211 SAR1AQ9NR31 198 aa20.91■□□□□ 0.94
PTCH1-210ENST00000468211 NBEAL1Q6ZS30 2694 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 CENPBD1B2RD01 187 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 MGRN1O60291 552 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 IGF2P01344 180 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 DAP3P51398 398 aaKnown RBP20.9■□□□□ 0.94
PTCH1-210ENST00000468211 LMO4P61968 165 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 CCL8P80075 99 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 MMEL1Q495T6 779 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 COQ5Q5HYK3 327 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 PABPC1L2AQ5JQF8 200 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 TMEM255AQ5JRV8 349 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 UGT2A3Q6UWM9 527 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 RFLNBQ8N5W9 214 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 ICA1LQ8NDH6 482 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 POLR2J2Q9GZM3 115 aaKnown RBP20.9■□□□□ 0.94
PTCH1-210ENST00000468211 POLR2J3Q9H1A7 115 aaKnown RBP20.9■□□□□ 0.94
PTCH1-210ENST00000468211 C1orf198Q9H425 327 aa20.9■□□□□ 0.94
PTCH1-210ENST00000468211 GMPR2Q9P2T1 348 aaKnown RBP20.9■□□□□ 0.94
PTCH1-210ENST00000468211 LOC100653049A0A140TA62 436 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 IQCMA0A1B0GVH7 501 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 KRT34O76011 436 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 GAAP10253 952 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 MRPS34P82930 218 aaKnown RBP20.89■□□□□ 0.93
PTCH1-210ENST00000468211 GLO1Q04760 184 aa20.89■□□□□ 0.93
PTCH1-210ENST00000468211 PLP2Q04941 152 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms