RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 KEAP1Q14145 624 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 SNCBQ16143 134 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 TTC23Q5W5X9 447 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 OR7E24Q6IFN5 339 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 SLC25A47Q6Q0C1 308 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 STAC2Q6ZMT1 411 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 DEPDC4Q8N2C3 294 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 DHRSXQ8N5I4 330 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 CYB561A3Q8NBI2 242 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 STEAP2Q8NFT2 490 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 DDOQ99489 341 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 NUAK2Q9H093 628 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 OR10A4Q9H209 315 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 RPRD1BQ9NQG5 326 aaKnown RBP13.38□□□□□ -0.27
SNIP1-202ENST00000468040 GMPPBQ9Y5P6 360 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 FKBP7Q9Y680 259 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 PCNX1Q96RV3 2341 aa13.38□□□□□ -0.27
SNIP1-202ENST00000468040 FREM1Q5H8C1 2179 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 PRR23D1E9PI22 279 aaPredicted RBP13.37□□□□□ -0.27
SNIP1-202ENST00000468040 LYZL6O75951 148 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 PRR23D2P0DMB1 279 aaPredicted RBP13.37□□□□□ -0.27
SNIP1-202ENST00000468040 CTLA4P16410 223 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 IL32P24001 234 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 UGT2B10P36537 528 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 GUCA1AP43080 201 aaPredicted RBP13.37□□□□□ -0.27
SNIP1-202ENST00000468040 SORDQ00796 357 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 TFF3Q07654 80 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 FAM27E3Q08E93 113 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 NRN1LQ496H8 165 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 C9orf135Q5VTT2 229 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 ANKRD16Q6P6B7 361 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 ZNF627Q7L945 461 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 BHLHA15Q7RTS1 189 aaPredicted RBP13.37□□□□□ -0.27
SNIP1-202ENST00000468040 C17orf78Q8N4C9 275 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 ZNF433Q8N7K0 673 aaPredicted RBP13.37□□□□□ -0.27
SNIP1-202ENST00000468040 OR8J1Q8NGP2 316 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 OR1K1Q8NGR3 316 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 FAM81AQ8TBF8 368 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 TRUB1Q8WWH5 349 aaKnown RBP13.37□□□□□ -0.27
SNIP1-202ENST00000468040 NSMAFQ92636 917 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 BOD1Q96IK1 185 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 FOXB1Q99853 325 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 APOL4Q9BPW4 351 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 ADI1Q9BV57 179 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 RACGAP1Q9H0H5 632 aa13.37□□□□□ -0.27
SNIP1-202ENST00000468040 KLF2Q9Y5W3 355 aaPredicted RBP13.37□□□□□ -0.27
SNIP1-202ENST00000468040 UBR5O95071 2799 aaPredicted RBP13.37□□□□□ -0.27
SNIP1-202ENST00000468040 IGKV1D-43A0A0B4J1Z2 117 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 H0YAE9 185 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 TLX2O43763 284 aaPredicted RBP13.36□□□□□ -0.27
SNIP1-202ENST00000468040 PRKYO43930 277 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 MPZL2O60487 215 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 RAD51DO75771 328 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 RNF224P0DH78 156 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 NPR2P20594 1047 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 CAPGP40121 348 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 PEX19P40855 299 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 HSPA13P48723 471 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 BLVRAP53004 296 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 AQP4P55087 323 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 FOXG1P55316 489 aaPredicted RBP13.36□□□□□ -0.27
SNIP1-202ENST00000468040 MRPS34P82930 218 aaKnown RBP13.36□□□□□ -0.27
SNIP1-202ENST00000468040 ARF1P84077 181 aaKnown RBP13.36□□□□□ -0.27
SNIP1-202ENST00000468040 EFNB1P98172 346 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 GLO1Q04760 184 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 IL18R1Q13478 541 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 C1QTNF12Q5T7M4 302 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 PLBD1Q6P4A8 553 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 IZUMO2Q6UXV1 221 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 ZBTB46Q86UZ6 589 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 P2RY8Q86VZ1 359 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 GLB1L2Q8IW92 636 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 OR6V1Q8N148 313 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 TCEANCQ8N8B7 351 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 PROKR2Q8NFJ6 384 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 TMEM163Q8TC26 289 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 CYGBQ8WWM9 190 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 OTULINQ96BN8 352 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 ZNF837Q96EG3 531 aaPredicted RBP13.36□□□□□ -0.27
SNIP1-202ENST00000468040 MUS81Q96NY9 551 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 NMNAT2Q9BZQ4 307 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 RERGLQ9H628 205 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 SRA1Q9HD15 236 aaKnown RBP13.36□□□□□ -0.27
SNIP1-202ENST00000468040 HINT3Q9NQE9 182 aaKnown RBP13.36□□□□□ -0.27
SNIP1-202ENST00000468040 TMEM38BQ9NVV0 291 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 B9D1Q9UPM9 204 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 UGT2A1Q9Y4X1 527 aa13.36□□□□□ -0.27
SNIP1-202ENST00000468040 ALPK2Q86TB3 2170 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 IGLV1-36A0A0B4J1U3 117 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 A0A1W2PPL8 197 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 FAM183AA6NL82 134 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 PRODHO43272 600 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 FARS2O95363 451 aaKnown RBP13.35□□□□□ -0.27
SNIP1-202ENST00000468040 OR8G3PP0DMU2 310 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
SNIP1-202ENST00000468040 PPP3CBP16298 524 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 SPI1P17947 270 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 HOXC12P31275 282 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 CENPAP49450 140 aa13.35□□□□□ -0.27
SNIP1-202ENST00000468040 ADARB1P78563 741 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms