RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 TMEM108Q6UXF1 575 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 PAMR1Q6UXH9 720 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 ZNF813Q6ZN06 617 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 ZNF704Q6ZNC4 412 aaPredicted RBP9.64□□□□□ -0.87
MSH5-212ENST00000467319 PTCHD4Q6ZW05 846 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 CCDC36Q8IYA8 594 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 HS3ST5Q8IZT8 346 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 GIPC3Q8TF64 312 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 GTPBP3Q969Y2 492 aaKnown RBP9.64□□□□□ -0.87
MSH5-212ENST00000467319 NABP1Q96AH0 204 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 NRBF2Q96F24 287 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 SAMD8Q96LT4 415 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 SNX18Q96RF0 628 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 FEVQ99581 238 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 NIPSNAP1Q9BPW8 284 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 ESRP2Q9H6T0 727 aaKnown RBP9.64□□□□□ -0.87
MSH5-212ENST00000467319 GRHPRQ9UBQ7 328 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 POFUT2Q9Y2G5 429 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 RNF115Q9Y4L5 304 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 AP4S1Q9Y587 144 aa9.64□□□□□ -0.87
MSH5-212ENST00000467319 MYO9AB2RTY4 2548 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 IGHV1-18A0A0C4DH31 117 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 SHISA9B4DS77 424 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 H3BNX3 289 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 ENTPD5O75356 428 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 E2F6O75461 281 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 FCGR1AP12314 374 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 CTLA4P16410 223 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 PTAFRP25105 342 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 CD40P25942 277 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 ZNF83P51522 516 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 RPS6KA3P51812 740 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 TUBA1BP68363 451 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 TUBA4AP68366 448 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 SPOCK1Q08629 439 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 THEM4Q5T1C6 240 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 ADAM5Q6NVV9 412 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 FAHD1Q6P587 224 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 KLHL17Q6TDP4 642 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 TUBA1AQ71U36 451 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 MYPOPQ86VE0 399 aaPredicted RBP9.63□□□□□ -0.87
MSH5-212ENST00000467319 SLC22A24Q8N4F4 322 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 KBTBD8Q8NFY9 601 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 LILRB1Q8NHL6 650 aaPredicted RBP9.63□□□□□ -0.87
MSH5-212ENST00000467319 IGFBPL1Q8WX77 278 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 NRGNQ92686 78 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 HTRA1Q92743 480 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 ZNF75AQ96N20 296 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 GABARAPL1Q9H0R8 117 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 DENND2DQ9H6A0 471 aaPredicted RBP9.63□□□□□ -0.87
MSH5-212ENST00000467319 PDP1Q9P0J1 537 aaPredicted RBP9.63□□□□□ -0.87
MSH5-212ENST00000467319 REV1Q9UBZ9 1251 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 IER3IP1Q9Y5U9 82 aa9.63□□□□□ -0.87
MSH5-212ENST00000467319 IGLV1-36A0A0B4J1U3 117 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 SOCS2O14508 198 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 XKRYO14609 159 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 GNGT2O14610 69 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 ARHGEF9O43307 516 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 IDH3BO43837 385 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 SOX14O95416 240 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 PLAUP00749 431 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 HLA-HP01893 362 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 CD3EP07766 207 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 IGFBP1P08833 259 aaPredicted RBP9.62□□□□□ -0.87
MSH5-212ENST00000467319 CECR9P0C854 216 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 OR8G3PP0DMU2 310 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 CBR1P16152 277 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 FASP25445 335 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 ZNF84P51523 738 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 UBE2NP61088 152 aaKnown RBP9.62□□□□□ -0.87
MSH5-212ENST00000467319 COX10Q12887 443 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 ALKBH2Q6NS38 261 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 ZFP1Q6P2D0 407 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 CDH24Q86UP0 819 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 MDP1Q86V88 176 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 SKA3Q8IX90 412 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 LNX2Q8N448 690 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 OR52L1Q8NGH7 329 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 OR4Q3Q8NH05 313 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 FGFBP3Q8TAT2 258 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 PYDC1Q8WXC3 89 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 DNAJC9Q8WXX5 260 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 ERMAPQ96PL5 475 aaPredicted RBP9.62□□□□□ -0.87
MSH5-212ENST00000467319 SLC38A2Q96QD8 506 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 RAB3IPQ96QF0 476 aaPredicted RBP9.62□□□□□ -0.87
MSH5-212ENST00000467319 IFT27Q9BW83 186 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 SYT4Q9H2B2 425 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 SEC61A2Q9H9S3 476 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 TBC1D23Q9NUY8 699 aa9.62□□□□□ -0.87
MSH5-212ENST00000467319 M0R1B8 84 aa9.61□□□□□ -0.87
MSH5-212ENST00000467319 ABCD4O14678 606 aa9.61□□□□□ -0.87
MSH5-212ENST00000467319 HS3ST1O14792 307 aa9.61□□□□□ -0.87
MSH5-212ENST00000467319 MGRN1O60291 552 aa9.61□□□□□ -0.87
MSH5-212ENST00000467319 UBL3O95164 117 aa9.61□□□□□ -0.87
MSH5-212ENST00000467319 CELA3BP08861 270 aa9.61□□□□□ -0.87
MSH5-212ENST00000467319 MMP7P09237 267 aaPredicted RBP9.61□□□□□ -0.87
MSH5-212ENST00000467319 ANXA8P13928 327 aa9.61□□□□□ -0.87
MSH5-212ENST00000467319 HIST1H1CP16403 213 aaKnown RBP9.61□□□□□ -0.87
MSH5-212ENST00000467319 ZNF14P17017 642 aaPredicted RBP9.61□□□□□ -0.87
MSH5-212ENST00000467319 CDAP32320 146 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms