RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 FNDC8Q8TC99 324 aa12.15□□□□□ -0.46
UBA3-209ENST00000466763 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
UBA3-209ENST00000466763 PLA2G12AQ9BZM1 189 aa12.15□□□□□ -0.46
UBA3-209ENST00000466763 SEC61A2Q9H9S3 476 aa12.15□□□□□ -0.46
UBA3-209ENST00000466763 NTN4Q9HB63 628 aa12.15□□□□□ -0.46
UBA3-209ENST00000466763 NPAP1Q9NZP6 1156 aa12.15□□□□□ -0.46
UBA3-209ENST00000466763 CENPEQ02224 2701 aa12.15□□□□□ -0.47
UBA3-209ENST00000466763 CADP27708 2225 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 ADGRG4Q8IZF6 3080 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 IGKV1D-43A0A0B4J1Z2 117 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 A0A1W2PPL8 197 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 SLC22A23A1A5C7 686 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 PRSS37A4D1T9 235 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 ARRDC5A6NEK1 342 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 G3V2T6 193 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 ENTPD5O75356 428 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 GOSR1O95249 250 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 FARS2O95363 451 aaKnown RBP12.14□□□□□ -0.47
UBA3-209ENST00000466763 RENP00797 406 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 HLA-HP01893 362 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 CD3EP07766 207 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 CDAP32320 146 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 CDKN2AP42771 156 aaKnown RBP12.14□□□□□ -0.47
UBA3-209ENST00000466763 CENPAP49450 140 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 BSPH1Q075Z2 132 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 COX10Q12887 443 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 SLC36A3Q495N2 470 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 LEG1Q6P5S2 330 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 SLC25A47Q6Q0C1 308 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 CDC20BQ86Y33 519 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 HIPK1Q86Z02 1210 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 LRRC18Q8N456 261 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 SLC22A24Q8N4F4 322 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 OR8D4Q8NGM9 314 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 TEX47Q8TBZ9 253 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 NANOS1Q8WY41 292 aaKnown RBP12.14□□□□□ -0.47
UBA3-209ENST00000466763 STMN2Q93045 179 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 NRBF2Q96F24 287 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 FOXN4Q96NZ1 517 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 SH3GL3Q99963 347 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 SYT4Q9H2B2 425 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 NELFAQ9H3P2 528 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 RNF121Q9H920 327 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 OBP2BQ9NPH6 170 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 TMEM38BQ9NVV0 291 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 IL20Q9NYY1 176 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 AKAP6Q13023 2319 aa12.14□□□□□ -0.47
UBA3-209ENST00000466763 ROS1P08922 2347 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 ARPC4-TTLL3A0A0A6YYG9 625 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 FAM221AA4D161 298 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 DPRXA6NFQ7 191 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 SAC3D1A6NKF1 404 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 IMPA2O14732 288 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 ARPC3O15145 178 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 IDH3BO43837 385 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 SLC16A7O60669 478 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 TXNDC12O95881 172 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 PLAUP00749 431 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 PATE4P0C8F1 98 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 OR8G3PP0DMU2 310 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 APEHP13798 732 aaKnown RBP12.13□□□□□ -0.47
UBA3-209ENST00000466763 HIST1H1CP16403 213 aaKnown RBP12.13□□□□□ -0.47
UBA3-209ENST00000466763 NPRL3Q12980 569 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 NCMAPQ5T1S8 102 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 C10orf128Q5T292 105 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 TMEM108Q6UXF1 575 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 CD300LDQ6UXZ3 194 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 PTCHD4Q6ZW05 846 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 SLC16A14Q7RTX9 510 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 ADCK1Q86TW2 530 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 MDP1Q86V88 176 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 ZDHHC13Q8IUH4 622 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 SKA3Q8IX90 412 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 CCDC36Q8IYA8 594 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 SDR9C7Q8NEX9 313 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 OR52E2Q8NGJ4 325 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 NMD3Q96D46 503 aaKnown RBP12.13□□□□□ -0.47
UBA3-209ENST00000466763 CENPNQ96H22 339 aaPredicted RBP12.13□□□□□ -0.47
UBA3-209ENST00000466763 RADILQ96JH8 1075 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 NMNAT3Q96T66 252 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 PKP2Q99959 881 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 KCNS3Q9BQ31 491 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 KCNN2Q9H2S1 579 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 UBTD1Q9HAC8 227 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 SMURF2Q9HAU4 748 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 SRA1Q9HD15 236 aaKnown RBP12.13□□□□□ -0.47
UBA3-209ENST00000466763 RNF115Q9Y4L5 304 aa12.13□□□□□ -0.47
UBA3-209ENST00000466763 ABCD4O14678 606 aa12.12□□□□□ -0.47
UBA3-209ENST00000466763 AHCYL1O43865 530 aa12.12□□□□□ -0.47
UBA3-209ENST00000466763 KHDRBS3O75525 346 aaKnown RBP12.12□□□□□ -0.47
UBA3-209ENST00000466763 RAB36O95755 333 aa12.12□□□□□ -0.47
UBA3-209ENST00000466763 BAG2O95816 211 aa12.12□□□□□ -0.47
UBA3-209ENST00000466763 OSMP13725 252 aa12.12□□□□□ -0.47
UBA3-209ENST00000466763 NPR2P20594 1047 aa12.12□□□□□ -0.47
UBA3-209ENST00000466763 PTDSS1P48651 473 aaKnown RBP12.12□□□□□ -0.47
UBA3-209ENST00000466763 IDH3GP51553 393 aaPredicted RBP12.12□□□□□ -0.47
UBA3-209ENST00000466763 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.12□□□□□ -0.47
UBA3-209ENST00000466763 ETFDHQ16134 617 aa12.12□□□□□ -0.47
UBA3-209ENST00000466763 GSG1Q2KHT4 349 aa12.12□□□□□ -0.47
UBA3-209ENST00000466763 ADAM5Q6NVV9 412 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms