RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SELENOVP59797 346 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 MRPS11P82912 194 aaKnown RBP16.4■□□□□ 0.22
COL9A3-206ENST00000466532 NRN1LQ496H8 165 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 RABL3Q5HYI8 236 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 METTL21CQ5VZV1 264 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 DEF8Q6ZN54 512 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 NKAIN4Q8IVV8 208 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 SYT14Q8NB59 555 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 RBM15BQ8NDT2 890 aaKnown RBP16.4■□□□□ 0.22
COL9A3-206ENST00000466532 SYNPRQ8TBG9 265 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 TMEM255BQ8WV15 326 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 ASB10Q8WXI3 467 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 MRPL13Q9BYD1 178 aaKnown RBP16.4■□□□□ 0.22
COL9A3-206ENST00000466532 GPR160Q9UJ42 338 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 BAG5Q9UL15 447 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 TANC2Q9HCD6 1990 aa16.4■□□□□ 0.22
COL9A3-206ENST00000466532 IQCMA0A1B0GVH7 501 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 FAM157AC9JC47 383 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 WNT9BO14905 357 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 PPIHO43447 177 aaKnown RBP16.39■□□□□ 0.21
COL9A3-206ENST00000466532 SHOX2O60902 331 aaPredicted RBP16.39■□□□□ 0.21
COL9A3-206ENST00000466532 TRMUO75648 421 aaKnown RBP16.39■□□□□ 0.21
COL9A3-206ENST00000466532 SNAP29O95721 258 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 TFP02787 698 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 ACADSP16219 412 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 AQP2P41181 271 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 RBM34P42696 430 aaKnown RBP16.39■□□□□ 0.21
COL9A3-206ENST00000466532 TMEM33P57088 247 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 ERVS71-1P61550 626 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 PLP2Q04941 152 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 HDXQ7Z353 690 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 HDDC2Q7Z4H3 204 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 CALHM3Q86XJ0 350 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 LRRC18Q8N456 261 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 OR1J2Q8NGS2 313 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 ZNF519Q8TB69 540 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 SNX33Q8WV41 574 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 LRRC58Q96CX6 371 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 SGTBQ96EQ0 304 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 TSPAN32Q96QS1 320 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 SEPHS2Q99611 448 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 SH3GL1Q99961 368 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 ECSITQ9BQ95 431 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 ZNF416Q9BWM5 594 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 RACGAP1Q9H0H5 632 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 LRMDAQ9H2I8 198 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 INIPQ9NRY2 104 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 C20orf141Q9NUB4 165 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 RIMS3Q9UJD0 308 aa16.39■□□□□ 0.21
COL9A3-206ENST00000466532 IGLV3-9A0A075B6K5 115 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 C17orf100A8MU93 164 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 CENPBD1B2RD01 187 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 HAX1O00165 279 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 RP2O75695 350 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 OR5F1O95221 314 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 ZNF250P15622 560 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 RAD52P43351 418 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 DAP3P51398 398 aaKnown RBP16.38■□□□□ 0.21
COL9A3-206ENST00000466532 PIN1Q13526 163 aaPredicted RBP16.38■□□□□ 0.21
COL9A3-206ENST00000466532 MMEL1Q495T6 779 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 TMEM154Q6P9G4 183 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 ICA1LQ8NDH6 482 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 OR8J3Q8NGG0 315 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 TMEM239Q8WW34 195 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 C11orf40Q8WZ69 217 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 TMEM120AQ9BXJ8 343 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 BCL2L14Q9BZR8 327 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 POLR2J2Q9GZM3 115 aaKnown RBP16.38■□□□□ 0.21
COL9A3-206ENST00000466532 POLR2J3Q9H1A7 115 aaKnown RBP16.38■□□□□ 0.21
COL9A3-206ENST00000466532 LPAR2Q9HBW0 351 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 HINT3Q9NQE9 182 aaKnown RBP16.38■□□□□ 0.21
COL9A3-206ENST00000466532 TREM2Q9NZC2 230 aa16.38■□□□□ 0.21
COL9A3-206ENST00000466532 FXYD1O00168 92 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 CDC14BO60729 498 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 IGF2P01344 180 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 MSMBP08118 114 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 MMP7P09237 267 aaPredicted RBP16.37■□□□□ 0.21
COL9A3-206ENST00000466532 ITGA2P17301 1181 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 APLNRP35414 380 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 OR1E2P47887 323 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 ZNF133P52736 654 aaPredicted RBP16.37■□□□□ 0.21
COL9A3-206ENST00000466532 UCP2P55851 309 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 CCL8P80075 99 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 HSF2Q03933 536 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 C10orf128Q5T292 105 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 MOSPD2Q8NHP6 518 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 TMEM186Q96B77 213 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 KCNN2Q9H2S1 579 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 VIPAS39Q9H9C1 493 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 HIF1ANQ9NWT6 349 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 SLCO1C1Q9NYB5 712 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 STX18Q9P2W9 335 aaKnown RBP16.37■□□□□ 0.21
COL9A3-206ENST00000466532 METRNQ9UJH8 293 aa16.37■□□□□ 0.21
COL9A3-206ENST00000466532 MGRN1O60291 552 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 SLC2A10O95528 541 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 GAAP10253 952 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 CDAP32320 146 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 PCGF3Q3KNV8 242 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 PABPC1L2AQ5JQF8 200 aa16.36■□□□□ 0.21
COL9A3-206ENST00000466532 ARMC4Q5T2S8 1044 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms