RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 RAB3IL1Q8TBN0 382 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF502Q8TBZ5 544 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 SLC7A13Q8TCU3 470 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 TMEM54Q969K7 222 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 TSNARE1Q96NA8 513 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 OR5B12Q96R08 314 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 SLC29A1Q99808 456 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 SH3GL1Q99961 368 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 KCTD14Q9BQ13 255 aaPredicted RBP1.3□□□□□ -2.2
CCDC93-205ENST00000466171 ECSITQ9BQ95 431 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 ANP32EQ9BTT0 268 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 OSBPL10Q9BXB5 764 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 DNTTIP1Q9H147 329 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 DEFB127Q9H1M4 99 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 CDC42EP4Q9H3Q1 356 aaKnown RBP1.3□□□□□ -2.2
CCDC93-205ENST00000466171 CWH43Q9H720 699 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 RPF2Q9H7B2 306 aaKnown RBP1.3□□□□□ -2.2
CCDC93-205ENST00000466171 UGT1A7Q9HAW7 530 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 UGT1A10Q9HAW8 530 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 UGT1A8Q9HAW9 530 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF331Q9NQX6 463 aaPredicted RBP1.3□□□□□ -2.2
CCDC93-205ENST00000466171 DCAF16Q9NXF7 216 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF226Q9NYT6 803 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 LSM7Q9UK45 103 aaKnown RBP1.3□□□□□ -2.2
CCDC93-205ENST00000466171 PRG3Q9Y2Y8 225 aaPredicted RBP1.3□□□□□ -2.2
CCDC93-205ENST00000466171 NFASCO94856 1347 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 CNTNAP1P78357 1384 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 RLFQ13129 1914 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 CEMIPQ8WUJ3 1361 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 MEGF6O75095 1541 aa1.3□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF816-ZNF321PA0A0X1KG74 233 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 OR2AG2A6NM03 316 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PES1O00541 588 aaKnown RBP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PEX7O00628 323 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 EIF3HO15372 352 aaKnown RBP eCLIP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 CD5LO43866 347 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 EIF3GO75821 320 aaKnown RBP eCLIP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 OR2J3O76001 311 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 FTH1P02794 183 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 FABP3P05413 133 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PLEKP08567 350 aaPredicted RBP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PSG2P11465 335 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 FOLR1P15328 257 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF30P17039 623 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 HOXA9P31269 272 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 SERPINB5P36952 375 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 NAA10P41227 235 aaPredicted RBP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 CXCL5P42830 114 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 NSG1P42857 185 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 SYKP43405 635 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 TFPI2P48307 235 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 RFX3P48380 749 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 TMED10P49755 219 aaKnown RBP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 NCBP2P52298 156 aaKnown RBP eCLIP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 CRISP3P54108 245 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PRRX1P54821 245 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PRMT2P55345 433 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 GGTLC2Q14390 218 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PRPSAP1Q14558 356 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 C16orf72Q14CZ0 275 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 RSPO1Q2MKA7 263 aaPredicted RBP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 ALKBH6Q3KRA9 238 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PIGGQ5H8A4 983 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 COA6Q5JTJ3 125 aaKnown RBP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PPM1LQ5SGD2 360 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 CCNJQ5T5M9 372 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 RAET1LQ5VY80 246 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 SLC25A48Q6ZT89 311 aaKnown RBP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 STRADAQ7RTN6 431 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PDIK1LQ8N165 341 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 LYPD1Q8N2G4 141 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 MDS2Q8NDY4 140 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 DUSP18Q8NEJ0 188 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 OR51G1Q8NGK1 321 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 FAM81AQ8TBF8 368 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 ACTRT1Q8TDG2 376 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 BLOC1S5Q8TDH9 187 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 GPR151Q8TDV0 419 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 FAM3DQ96BQ1 224 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 ECHDC3Q96DC8 303 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 AURKBQ96GD4 344 aaPredicted RBP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PKNOX2Q96KN3 472 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 CEP170P1Q96L14 293 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PANX1Q96RD7 426 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 P2RX4Q99571 388 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 C20orf24Q9BUV8 137 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 VPS37BQ9H9H4 285 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 FGF20Q9NP95 211 aaPredicted RBP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 CTPS2Q9NRF8 586 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 RAB20Q9NX57 234 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 STOX2Q9P2F5 926 aaPredicted RBP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 GOLT1BQ9Y3E0 138 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 F11RQ9Y624 299 aaKnown RBP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 MRPS18BQ9Y676 258 aaKnown RBP1.29□□□□□ -2.2
CCDC93-205ENST00000466171 WSB1Q9Y6I7 421 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 USP47Q96K76 1375 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 NINLQ9Y2I6 1382 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 LTBP1Q14766 1721 aa1.29□□□□□ -2.2
CCDC93-205ENST00000466171 PHF3Q92576 2039 aaKnown RBP1.28□□□□□ -2.2
CCDC93-205ENST00000466171 A0A075B6Q4 140 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms