RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 YRDCQ86U90 279 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 ZNF786Q8N393 782 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 RBMXL3Q8N7X1 1067 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 EXD3Q8N9H8 876 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 SLC37A3Q8NCC5 494 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 NPEPL1Q8NDH3 523 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 OR6X1Q8NH79 312 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 OR2V1Q8NHB1 315 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 OR14L1PQ8NHC6 308 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 MOSPD2Q8NHP6 518 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 C9orf43Q8TAL5 461 aaPredicted RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 NEIL3Q8TAT5 605 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 ZNF519Q8TB69 540 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 FANK1Q8TC84 345 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 GGHQ92820 318 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 MYDGFQ969H8 173 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 ABTB1Q969K4 478 aaPredicted RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 CPNE4Q96A23 557 aaPredicted RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 INTS12Q96CB8 462 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 ZHX1-C8orf76Q96EF9 292 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 ADAD1Q96M93 576 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 JSRP1Q96MG2 331 aaPredicted RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 SFXN2Q96NB2 322 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 ZNF582Q96NG8 517 aaPredicted RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 ERMAPQ96PL5 475 aaPredicted RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 IFT27Q9BW83 186 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 CDCA4Q9BXL8 241 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 MRPL13Q9BYD1 178 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 HES7Q9BYE0 225 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 MRPS26Q9BYN8 205 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 NMNAT2Q9BZQ4 307 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 OR11A1Q9GZK7 315 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 FGF20Q9NP95 211 aaPredicted RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 TIGARQ9NQ88 270 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 VSX1Q9NZR4 365 aaPredicted RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 KLHL13Q9P2N7 655 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 GRHPRQ9UBQ7 328 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 WARS2Q9UGM6 360 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 SCOCQ9UIL1 159 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 ZNF346Q9UL40 294 aaKnown RBP4.88□□□□□ -1.63
VPS41-211ENST00000466017 FKBP7Q9Y680 259 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 WDR87Q6ZQQ6 2873 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 FREM3P0C091 2139 aa4.88□□□□□ -1.63
VPS41-211ENST00000466017 FRYLO94915 3013 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 IGKV3D-15A0A087WSY6 115 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 TRGV5A0A0B4J1U4 118 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 A0A0G2JMM0 328 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 A0A1W2PPB8 328 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 A0A1W2PRG6 482 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 A0A1W2PRS3 328 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 A0A1W2PRX2 142 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 KIR3DP1A8MWS1 328 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 AHRRA9YTQ3 701 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 MCIDASD6RGH6 385 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 PRR23D1E9PI22 279 aaPredicted RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 G3V3Y1 287 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 H3BML4 177 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 J3QRE1 110 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 AKAP8O43823 692 aaKnown RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 GMFGO60234 142 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 CYTIPO60759 359 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 ENTPD6O75354 484 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 TRAPPC6AO75865 159 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 PPP1R3DO95685 299 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 BCL10O95999 233 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 FSHBP01225 129 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 TFAP2AP05549 437 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 CDK1P06493 297 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 HOXD4P09016 255 aaPredicted RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 PRR23D2P0DMB1 279 aaPredicted RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 ADORA3P0DMS8 318 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 NR2C1P13056 603 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 HIST1H1CP16403 213 aaKnown RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 ZNF708P17019 499 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 ZNF3P17036 446 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 CCNA2P20248 432 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 PAICSP22234 425 aaKnown RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 SLC2A5P22732 501 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 GTF2E2P29084 291 aaKnown RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 TTKP33981 857 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 RPL4P36578 427 aaKnown RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 CDKN2AP42771 156 aaKnown RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 MAGEA5P43359 124 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 KIR2DL3P43628 341 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 RPL5P46777 297 aaKnown RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 ALDH3B2P48448 385 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 DAP3P51398 398 aaKnown RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 SUCLG1P53597 346 aaKnown RBP4.87□□□□□ -1.63
VPS41-211ENST00000466017 NR1H2P55055 460 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 CLDN18P56856 261 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 OR2B6P58173 313 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 HSF1Q00613 529 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS41-211ENST00000466017 LGALS3BPQ08380 585 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 RAB40BQ12829 278 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 GGTLC2Q14390 218 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 IRF3Q14653 427 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 SLC17A1Q14916 467 aa4.87□□□□□ -1.63
VPS41-211ENST00000466017 SF3B4Q15427 424 aaKnown RBP eCLIP4.87□□□□□ -1.631e-6■■■■■ 43.7
VPS41-211ENST00000466017 OR7A5Q15622 319 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms