RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 AGR2O95994 175 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 CHEK2O96017 543 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 IGHV3-13P01766 116 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 NCF2P19878 526 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-214ENST00000465269 PRPS1L1P21108 318 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 MAPK1P28482 360 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 GYS2P54840 703 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 DBPQ10586 325 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-214ENST00000465269 FAM209AQ5JX71 171 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 C6orf136Q5SQH8 315 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 THEM4Q5T1C6 240 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 WDR88Q6ZMY6 472 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 KLHL36Q8N4N3 616 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 FNDC5Q8NAU1 212 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 OR1J1Q8NGS3 322 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 OR6N1Q8NGY5 312 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 PNPT1Q8TCS8 783 aaKnown RBP12.52□□□□□ -0.41
HDAC6-214ENST00000465269 ITPKCQ96DU7 683 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 MSL2Q9HCI7 577 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 MARCOQ9UEW3 520 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-214ENST00000465269 KLHL21Q9UJP4 597 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 SACSQ9NZJ4 4579 aa12.52□□□□□ -0.41
HDAC6-214ENST00000465269 CDHR4A6H8M9 788 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 C5orf63A6NC05 138 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 MS4A18H0YCH9 400 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 AIM2O14862 343 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 POLR3GO15318 223 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-214ENST00000465269 ZNF205O95201 554 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 IGHV4-59P01825 116 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 OPN1MWP04001 364 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 OPN1MW2P0DN77 364 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 OPN1MW3P0DN78 364 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 CHI3L1P36222 383 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-214ENST00000465269 MDH1P40925 334 aaKnown RBP12.51□□□□□ -0.41
HDAC6-214ENST00000465269 PCBP3P57721 371 aaKnown RBP12.51□□□□□ -0.41
HDAC6-214ENST00000465269 COPZ1P61923 177 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 SLC3A1Q07837 685 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 PMS2P3Q13401 168 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 MAPK11Q15759 364 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 MS4A18Q3C1V0 323 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 ESCO2Q56NI9 601 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 XKR7Q5GH72 579 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 C6orf89Q6UWU4 347 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 RNF165Q6ZSG1 346 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 Q6ZSV7 163 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 SERPINA11Q86U17 422 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 UEVLDQ8IX04 471 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 C1orf174Q8IYL3 243 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 SPICQ8N5J4 248 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 NATD1Q8N6N6 113 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 STK35Q8TDR2 534 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 PPP3R2Q96LZ3 170 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 TRNT1Q96Q11 434 aaKnown RBP12.51□□□□□ -0.41
HDAC6-214ENST00000465269 CHST2Q9Y4C5 530 aa12.51□□□□□ -0.41
HDAC6-214ENST00000465269 MT-ND5P03915 603 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 DBIP07108 87 aaKnown RBP12.5□□□□□ -0.41
HDAC6-214ENST00000465269 CCNOP22674 350 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 UQCRC2P22695 453 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 COX20Q5RI15 118 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 NHLRC1Q6VVB1 395 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 LRRC28Q86X40 367 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-214ENST00000465269 ZNF101Q8IZC7 436 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 SLC22A24Q8N4F4 322 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 C11orf44Q8N8P7 122 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 SGCDQ92629 289 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 SLC47A1Q96FL8 570 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 SLC35A5Q9BS91 424 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 EGLN1Q9GZT9 426 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 TOR3AQ9H497 397 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 RNF121Q9H920 327 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 B3GAT2Q9NPZ5 323 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 TMEM106BQ9NUM4 274 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 HAO1Q9UJM8 370 aa12.5□□□□□ -0.41
HDAC6-214ENST00000465269 IGHV2-70DA0A0C4DH43 119 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 CEACAM18A8MTB9 384 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 AKAP8O43823 692 aaKnown RBP12.49□□□□□ -0.41
HDAC6-214ENST00000465269 MFN2O95140 757 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 FGF12P61328 243 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 BTG1P62324 171 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 GNA13Q14344 377 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 LRRC74BQ6ZQY2 392 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 H1FNTQ75WM6 255 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-214ENST00000465269 ZNF440Q8IYI8 595 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 OR52P1PQ8NH57 321 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 DACT3Q96B18 629 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-214ENST00000465269 THOC1Q96FV9 657 aaKnown RBP12.49□□□□□ -0.41
HDAC6-214ENST00000465269 C7orf26Q96N11 449 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 NUF2Q9BZD4 464 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 DENND2DQ9H6A0 471 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-214ENST00000465269 MTHFD2LQ9H903 347 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-214ENST00000465269 TCF7L2Q9NQB0 619 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 FAM53CQ9NYF3 392 aa12.49□□□□□ -0.41
HDAC6-214ENST00000465269 IGKV1D-42A0A075B6H8 117 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 PLSCR5A0PG75 271 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 LRRN3E7EW58 273 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 RNASET2O00584 256 aaKnown RBP12.48□□□□□ -0.41
HDAC6-214ENST00000465269 VIMP08670 466 aaKnown RBP12.48□□□□□ -0.41
HDAC6-214ENST00000465269 WNT2P09544 360 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 PPIAL4GP0DN37 164 aa12.48□□□□□ -0.41
HDAC6-214ENST00000465269 NR2F1P10589 423 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms