RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ACMSDQ8TDX5 336 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 GIMAP1Q8WWP7 306 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 SRSF12Q8WXF0 261 aaKnown RBP2.65□□□□□ -1.99
CLK1-208ENST00000464454 SLC38A4Q969I6 547 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 RACGAP1Q9H0H5 632 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 IFI27L2Q9H2X8 130 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 CDC42EP4Q9H3Q1 356 aaKnown RBP2.65□□□□□ -1.99
CLK1-208ENST00000464454 RPF2Q9H7B2 306 aaKnown RBP2.65□□□□□ -1.99
CLK1-208ENST00000464454 SAMSN1Q9NSI8 373 aaKnown RBP2.65□□□□□ -1.99
CLK1-208ENST00000464454 KIAA1257Q9ULG3 409 aa2.65□□□□□ -1.99
CLK1-208ENST00000464454 F11RQ9Y624 299 aaKnown RBP2.65□□□□□ -1.99
CLK1-208ENST00000464454 WDR62O43379 1518 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 IGLV11-55A0A075B6I3 123 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 TMX2-CTNND1H3BSU7 103 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 CDC7O00311 574 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 RAB29O14966 203 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 ICOSLGO75144 302 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 EEDO75530 441 aaKnown RBP2.64□□□□□ -1.99
CLK1-208ENST00000464454 IGLV2-23P01705 113 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 FTH1P02794 183 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 PRB2P02812 416 aaPredicted RBP2.64□□□□□ -1.99
CLK1-208ENST00000464454 TPM2P07951 284 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 PLEKP08567 350 aaPredicted RBP2.64□□□□□ -1.99
CLK1-208ENST00000464454 PABPC4LP0CB38 370 aaKnown RBP2.64□□□□□ -1.99
CLK1-208ENST00000464454 ZNF30P17039 623 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 OMGP23515 440 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 CXCL5P42830 114 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 CDKN1BP46527 198 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 TMED10P49755 219 aaKnown RBP2.64□□□□□ -1.99
CLK1-208ENST00000464454 HERVK_113P61574 105 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 TWF1Q12792 350 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 TTLL9Q3SXZ7 439 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 ANKRD26P1Q6NSI1 321 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 CERS6Q6ZMG9 384 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 TIFABQ6ZNK6 161 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 ABHD13Q7L211 337 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 ENTHD1Q8IYW4 607 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 GTPBP8Q8N3Z3 284 aaPredicted RBP2.64□□□□□ -1.99
CLK1-208ENST00000464454 FBXL13Q8NEE6 735 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 OR4C5Q8NGB2 326 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 MARCH1Q8TCQ1 289 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 ELMO1Q92556 727 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 KIFAP3Q92845 792 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 IL22RA2Q969J5 263 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 EXOSC8Q96B26 276 aaKnown RBP2.64□□□□□ -1.99
CLK1-208ENST00000464454 LRRC58Q96CX6 371 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 PKNOX2Q96KN3 472 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 CHP1Q99653 195 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 LINC00597Q9H2U6 94 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 NEK6Q9HC98 313 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 FGF20Q9NP95 211 aaPredicted RBP2.64□□□□□ -1.99
CLK1-208ENST00000464454 LSM7Q9UK45 103 aaKnown RBP2.64□□□□□ -1.99
CLK1-208ENST00000464454 GOLT1BQ9Y3E0 138 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 ASTN1O14525 1302 aa2.64□□□□□ -1.99
CLK1-208ENST00000464454 NSD2O96028 1365 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 CNTNAP1P78357 1384 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 CARMIL3Q8ND23 1372 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 TRBV11-1A0A0K0K1C0 115 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 PLAC8L1A1L4L8 177 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 HIDE1A8MVS5 230 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 SGK1O00141 431 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 LSM1O15116 133 aaKnown RBP2.63□□□□□ -1.99
CLK1-208ENST00000464454 KMOO15229 486 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 OR2J3O76001 311 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 KRT14P02533 472 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 IGKV3-11P04433 115 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 ANXA5P08758 320 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 RRM2P31350 389 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 OTX1P32242 354 aaPredicted RBP2.63□□□□□ -1.99
CLK1-208ENST00000464454 RFX3P48380 749 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 NUTF2P61970 127 aaKnown RBP2.63□□□□□ -1.99
CLK1-208ENST00000464454 ACTA2P62736 377 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 ACTG2P63267 376 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 ACTC1P68032 377 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 ACTA1P68133 377 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 ADARB1P78563 741 aaKnown RBP2.63□□□□□ -1.99
CLK1-208ENST00000464454 CUL2Q13617 745 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 GGTLC2Q14390 218 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 RSPO1Q2MKA7 263 aaPredicted RBP2.63□□□□□ -1.99
CLK1-208ENST00000464454 CCNJQ5T5M9 372 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 TSPO2Q5TGU0 170 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 PRAMEF20Q5VT98 475 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 C9orf135Q5VTT2 229 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 LRRC66Q68CR7 880 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 LYPD2Q6UXB3 125 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 ZNF493Q6ZR52 646 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 Q6ZSR3 168 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 STRADAQ7RTN6 431 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 LINC01551Q86U37 167 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 PCP2Q8IVA1 136 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 ZNF786Q8N393 782 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 OR10R2Q8NGX6 335 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 LKAAEAR1Q8TD35 194 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 TAAR1Q96RJ0 339 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 MRPL37Q9BZE1 423 aaKnown RBP2.63□□□□□ -1.99
CLK1-208ENST00000464454 RAB20Q9NX57 234 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 RBAKQ9NYW8 714 aaPredicted RBP2.63□□□□□ -1.99
CLK1-208ENST00000464454 UXTQ9UBK9 157 aaPredicted RBP2.63□□□□□ -1.99
CLK1-208ENST00000464454 CD84Q9UIB8 345 aa2.63□□□□□ -1.99
CLK1-208ENST00000464454 ZNF223Q9UK11 482 aaPredicted RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms