RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 ETFDHQ16134 617 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 MSMPQ1L6U9 139 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 FGD3Q5JSP0 725 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 C10orf128Q5T292 105 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 KRT80Q6KB66 452 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 C16orf89Q6UX73 402 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 CLEC9AQ6UXN8 241 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 RINLQ6ZS11 566 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 CCDC197Q8NCU1 140 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 OR4F15Q8NGB8 312 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 ZNF519Q8TB69 540 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 NSL1Q96IY1 281 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 DHRS1Q96LJ7 313 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 GPA33Q99795 319 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 ADAM21Q9UKJ8 722 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 ADAM18Q9Y3Q7 739 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 RTTNQ86VV8 2226 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 CENPBD1B2RD01 187 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 PTP4A3O75365 173 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 UBL3O95164 117 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 IGHMP01871 453 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 OMPP47874 163 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 LIMS1P48059 325 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 SLC9A3P48764 834 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 ERVK-25P63136 954 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 CDK20Q8IZL9 346 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 LRRC18Q8N456 261 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 IL17RDQ8NFM7 739 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 NSMAFQ92636 917 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 NABP1Q96AH0 204 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 NSMCE2Q96MF7 247 aa11.21□□□□□ -0.62
XRN1-203ENST00000463916 SVEP1Q4LDE5 3571 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 TMEM129A0AVI4 362 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 RAB36O95755 333 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 CCL2P13500 99 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 NR4A1P22736 598 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 RIPPLY3P57055 190 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 FXYD6P3P58550 94 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 CHRNB3Q05901 458 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 CD47Q08722 323 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 SNTB2Q13425 540 aaKnown RBP11.2□□□□□ -0.62
XRN1-203ENST00000463916 ZBED5Q49AG3 693 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 SLC25A47Q6Q0C1 308 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 CYP2R1Q6VVX0 501 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 RRM2BQ7LG56 351 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 ZCCHC24Q8N2G6 241 aaKnown RBP11.2□□□□□ -0.62
XRN1-203ENST00000463916 PAQR4Q8N4S7 273 aaPredicted RBP11.2□□□□□ -0.62
XRN1-203ENST00000463916 ZNF525Q8N782 197 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 NANOS1Q8WY41 292 aaKnown RBP11.2□□□□□ -0.62
XRN1-203ENST00000463916 REG4Q9BYZ8 158 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 IL20RAQ9UHF4 553 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 SIGLEC7Q9Y286 467 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 FN1P02751 2386 aaKnown RBP11.2□□□□□ -0.62
XRN1-203ENST00000463916 IGHV4-30-2A0A087WSY4 118 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 H7C1C5 153 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 GPRIN2O60269 458 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 SERPINA5P05154 406 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 MMP7P09237 267 aaPredicted RBP11.2□□□□□ -0.62
XRN1-203ENST00000463916 ATP6V1B2P21281 511 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 ZNF84P51523 738 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 MNAT1P51948 309 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 NUDT6P53370 316 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 LCN6P62502 163 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 DAG1Q14118 895 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 TAF11Q15544 211 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 EFNB3Q15768 340 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 THSD4Q6ZMP0 1018 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 FAM122BQ7Z309 247 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 HDDC2Q7Z4H3 204 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 Q96M85 177 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 SORCS2Q96PQ0 1159 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 PLK3Q9H4B4 646 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 DENND2DQ9H6A0 471 aaPredicted RBP11.2□□□□□ -0.62
XRN1-203ENST00000463916 ZNF442Q9H7R0 627 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 BARX1Q9HBU1 254 aaPredicted RBP11.2□□□□□ -0.62
XRN1-203ENST00000463916 IL1RAPQ9NPH3 570 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 NDE1Q9NXR1 346 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 PMF1-BGLAPU3KQ54 211 aa11.2□□□□□ -0.62
XRN1-203ENST00000463916 SH3PXD2BA1X283 911 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 B9A039 149 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 PDE5AO76074 875 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 HEXAP06865 529 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 IGFBP1P08833 259 aaPredicted RBP11.19□□□□□ -0.62
XRN1-203ENST00000463916 NPR2P20594 1047 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 RPL4P36578 427 aaKnown RBP11.19□□□□□ -0.62
XRN1-203ENST00000463916 MRPS34P82930 218 aaKnown RBP11.19□□□□□ -0.62
XRN1-203ENST00000463916 MS4A2Q01362 244 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 KRTAP1-1Q07627 177 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 ANKDD1AQ495B1 522 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 NRN1LQ496H8 165 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 SLC16A14Q7RTX9 510 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 ZER1Q7Z7L7 766 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 SVOPLQ8N434 492 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 ARIH2OSQ8N7S6 290 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 OR10H5Q8NGA6 315 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 DOK1Q99704 481 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 SIAEQ9HAT2 523 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 SMURF2Q9HAU4 748 aa11.19□□□□□ -0.62
XRN1-203ENST00000463916 STX18Q9P2W9 335 aaKnown RBP11.19□□□□□ -0.62
XRN1-203ENST00000463916 CR1P17927 2039 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms