RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 POLR3KQ9Y2Y1 108 aaPredicted RBP12.24□□□□□ -0.45
SMC1A-204ENST00000463684 INSIG2Q9Y5U4 225 aa12.24□□□□□ -0.45
SMC1A-204ENST00000463684 NPTNQ9Y639 398 aa12.24□□□□□ -0.45
SMC1A-204ENST00000463684 TRAPPC2LH3BP13 241 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 TM9SF1O15321 606 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 BIRC5O15392 142 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 TYROBPO43914 113 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 GPANK1O95872 356 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 MT-ATP6P00846 226 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 ETS2P15036 469 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 ZNF12P17014 697 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 LIPAP38571 399 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 MMP15P51511 669 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 HSF2Q03933 536 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 RGNQ15493 299 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 THEM4Q5T1C6 240 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 LRFN4Q6PJG9 635 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 SPICQ8N5J4 248 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 OR5J2Q8NH18 312 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 MAL2Q969L2 176 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 SLC25A44Q96H78 314 aaPredicted RBP12.23□□□□□ -0.45
SMC1A-204ENST00000463684 ITCHQ96J02 903 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 DCLRE1CQ96SD1 692 aaKnown RBP12.23□□□□□ -0.45
SMC1A-204ENST00000463684 DIRC2Q96SL1 478 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 KCNN2Q9H2S1 579 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 RAD21L1Q9H4I0 556 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 BEX1Q9HBH7 125 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 A4GALTQ9NPC4 353 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 ZDHHC8Q9ULC8 765 aa12.23□□□□□ -0.45
SMC1A-204ENST00000463684 LRRN3E7EW58 273 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 M0QZ24 198 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 SLC22A3O75751 556 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 CRYBA1P05813 215 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 QDPRP09417 244 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 NUDT7P0C024 238 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 OR1Q1Q15612 314 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 GTDC1Q4AE62 458 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 C6orf10Q5SRN2 563 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 CEP85LQ5SZL2 805 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 ZNF362Q5T0B9 420 aaPredicted RBP12.22□□□□□ -0.45
SMC1A-204ENST00000463684 KRT73Q86Y46 540 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 VPS33AQ96AX1 596 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 SORT1Q99523 831 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 PKP2Q99959 881 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 TMEM43Q9BTV4 400 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 SPATA5L1Q9BVQ7 753 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 ROPN1BQ9BZX4 212 aaPredicted RBP12.22□□□□□ -0.45
SMC1A-204ENST00000463684 MMP27Q9H306 513 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 ROPN1Q9HAT0 212 aaPredicted RBP12.22□□□□□ -0.45
SMC1A-204ENST00000463684 PATZ1Q9HBE1 687 aaKnown RBP12.22□□□□□ -0.45
SMC1A-204ENST00000463684 NPHS2Q9NP85 383 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 PNPOQ9NVS9 261 aa12.22□□□□□ -0.45
SMC1A-204ENST00000463684 PDP1Q9P0J1 537 aaPredicted RBP12.22□□□□□ -0.45
SMC1A-204ENST00000463684 A0A0B4J2E0 115 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 A0A1B0GX12 115 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 TIMM23O14925 209 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 RNF13O43567 381 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 MGRN1O60291 552 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 IGHV2-70P01814 119 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 STOMP27105 288 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 SLC6A9P48067 706 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 ZNF84P51523 738 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 SRSF4Q08170 494 aaKnown RBP12.21□□□□□ -0.45
SMC1A-204ENST00000463684 STX3Q13277 289 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 NRN1LQ496H8 165 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 ZMAT1Q5H9K5 638 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 SPATA46Q5T0L3 261 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 DHRS4L2Q6PKH6 230 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 BRICD5Q6PL45 260 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 LRRC18Q8N456 261 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 KIR3DL3Q8N743 410 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 HIPK4Q8NE63 616 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 OR4F5Q8NH21 305 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 IPCEF1Q8WWN9 437 aaPredicted RBP12.21□□□□□ -0.45
SMC1A-204ENST00000463684 GEMIN6Q8WXD5 167 aaKnown RBP12.21□□□□□ -0.45
SMC1A-204ENST00000463684 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMC1A-204ENST00000463684 MARS2Q96GW9 593 aaKnown RBP12.21□□□□□ -0.45
SMC1A-204ENST00000463684 SLC19A3Q9BZV2 496 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 CGGBP1Q9UFW8 167 aaPredicted RBP12.21□□□□□ -0.45
SMC1A-204ENST00000463684 OR5V1Q9UGF6 321 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 HAO1Q9UJM8 370 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 SLC13A4Q9UKG4 626 aa12.21□□□□□ -0.45
SMC1A-204ENST00000463684 IGHV3OR16-10A0A075B7F0 116 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 ZSCAN5BA6NJL1 495 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 CLIC1O00299 241 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 SDHDO14521 159 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 ADH4P08319 380 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 IDO1P14902 403 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 MPV17P39210 176 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 CDH12P55289 794 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 RGS8P57771 180 aaPredicted RBP12.2□□□□□ -0.46
SMC1A-204ENST00000463684 CLRN1P58418 232 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 TNFAIP6P98066 277 aaPredicted RBP12.2□□□□□ -0.46
SMC1A-204ENST00000463684 PAX8Q06710 450 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 FADDQ13158 208 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 MELKQ14680 651 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 TMEM155Q4W5P6 130 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 ESCO2Q56NI9 601 aa12.2□□□□□ -0.46
SMC1A-204ENST00000463684 SWT1Q5T5J6 900 aaKnown RBP12.2□□□□□ -0.46
SMC1A-204ENST00000463684 MBNL2Q5VZF2 373 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms