RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SONP18583 2426 aaKnown RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 IGKV1D-42A0A075B6H8 117 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 TRBV4-1A0A0J9YWV2 114 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 A0A1B0GWA3 101 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 TRIM64A6NGJ6 449 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 TUBAL3A6NHL2 446 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 TRIM64BA6NI03 449 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 AQP12BA6NM10 295 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 KDM4EB2RXH2 506 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 LRRN3E7EW58 273 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 H0YC42 278 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 MGRN1O60291 552 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 WDR1O75083 606 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 TRIM3O75382 744 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 AK1P00568 194 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 CSTAP01040 98 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 IFNA2P01563 188 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 OPN1LWP04000 364 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 DBIP07108 87 aaKnown RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 IGFBP1P08833 259 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PAX1P15863 534 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 IL7RP16871 459 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ATP6V1C1P21283 382 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 MAGEA8P43361 318 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 UGT2B15P54855 530 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 TPD52P55327 224 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 B3GALT5-AS1P59052 145 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PPIAP62937 165 aaKnown RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 HPCAP84074 193 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 EPS8Q12929 822 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 FOXF1Q12946 379 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 RCN1Q15293 331 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 HYAL4Q2M3T9 481 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 LIN52Q52LA3 116 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 IFI44LQ53G44 452 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 FAM209BQ5JX69 171 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PIK3CD-AS1Q5SR53 167 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 DCST1Q5T197 706 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PRAMEF8Q5VWM4 474 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PRAMEF7Q5VXH5 474 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 LPCAT4Q643R3 524 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF474Q6S9Z5 364 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 KLHL17Q6TDP4 642 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PATL1Q86TB9 770 aaKnown RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 HIPK1Q86Z02 1210 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ZDHHC21Q8IVQ6 265 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 WDFY1Q8IWB7 410 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 AQP12AQ8IXF9 295 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 TMEM156Q8N614 296 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 FADS6Q8N9I5 356 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 RELL2Q8NC24 303 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PAPD5Q8NDF8 572 aaKnown RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 OR52E4Q8NGH9 312 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 OR5L2Q8NGL0 311 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 OR5M9Q8NGP3 310 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 SLC22A8Q8TCC7 542 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 GLMPQ8WWB7 406 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 SMPDL3BQ92485 455 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 NPIPB3Q92617 1050 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PIGTQ969N2 578 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 DUS3LQ96G46 650 aaKnown RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 RSRC1Q96IZ7 334 aaKnown RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF479Q96JC4 524 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 RNF145Q96MT1 663 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF300Q96RE9 604 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 DOHHQ9BU89 302 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ABHD14AQ9BUJ0 271 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 CHID1Q9BWS9 393 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 OSBPL11Q9BXB4 747 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PINK1Q9BXM7 581 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ANGPTL4Q9BY76 406 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 DSN1Q9H410 356 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 MTHFD2LQ9H903 347 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 UBQLN4Q9NRR5 601 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 HPF1Q9NWY4 346 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF629Q9UEG4 869 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-204ENST00000463622 LAMP3Q9UQV4 416 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 CFL2Q9Y281 166 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 DTNAQ9Y4J8 743 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 WIF1Q9Y5W5 379 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 U3KQV3 271 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 EML6Q6ZMW3 1958 aa3.19□□□□□ -1.9
SCFD1-204ENST00000463622 PCNX3Q9H6A9 2034 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 A0A1W2PQD3 144 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 MBD3L5A6NJ08 208 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-204ENST00000463622 SAC3D1A6NKF1 404 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 HSPB2A8KAH6 182 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 FAM166BA8MTA8 275 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 PDLIM1O00151 329 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 DLGAP1O14490 977 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 TNFRSF13BO14836 293 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-204ENST00000463622 HCRTR2O43614 444 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 SMPD2O60906 423 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 MITFO75030 526 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-204ENST00000463622 CIB2O75838 187 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 SOX30O94993 753 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 ATP6V1G2O95670 118 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 AGR2O95994 175 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 GUSBP08236 651 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 LINGO3P0C6S8 592 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms