RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 B3GALT5Q9Y2C3 310 aa11.47□□□□□ -0.57
VAPB-203ENST00000463370 MRPS18BQ9Y676 258 aaKnown RBP11.47□□□□□ -0.57
VAPB-203ENST00000463370 ZFHX4Q86UP3 3567 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 ZNF879B4DU55 563 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 GPRIN2O60269 458 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 HNRNPCP07910 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
VAPB-203ENST00000463370 TACSTD2P09758 323 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 CFL1P23528 166 aaKnown RBP11.46□□□□□ -0.57
VAPB-203ENST00000463370 RANBP1P43487 201 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 DAP3P51398 398 aaKnown RBP11.46□□□□□ -0.57
VAPB-203ENST00000463370 OR2B6P58173 313 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 EGR3Q06889 387 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 IL18Q14116 193 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 CARTPTQ16568 116 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 HSD17B12Q53GQ0 312 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 AGAP7PQ5VUJ5 663 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 MZT2AQ6P582 158 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 CCBE1Q6UXH8 406 aaPredicted RBP11.46□□□□□ -0.57
VAPB-203ENST00000463370 KCTD20Q7Z5Y7 419 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 GPAT4Q86UL3 456 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 SAMD12Q8N8I0 201 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 OR2G2Q8NGZ5 317 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 NSMAFQ92636 917 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 LIN37Q96GY3 246 aaPredicted RBP11.46□□□□□ -0.57
VAPB-203ENST00000463370 DERL3Q96Q80 235 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 TTYH2Q9BSA4 534 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 DDA1Q9BW61 102 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 ELOVL3Q9HB03 270 aa11.46□□□□□ -0.57
VAPB-203ENST00000463370 SDK2Q58EX2 2172 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 AHCTF1Q8WYP5 2266 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 OR4C45A6NMZ5 311 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 FAM25AB3EWG3 89 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 FAM25CB3EWG5 89 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 FAM25GB3EWG6 89 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 ZIC3O60481 467 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 FZD7O75084 574 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 GATBO75879 557 aaKnown RBP11.46□□□□□ -0.58
VAPB-203ENST00000463370 MT-CO3P00414 261 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 PNPP00491 289 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 F10P00742 488 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 EPXP11678 715 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 SNRPBP14678 240 aaKnown RBP11.46□□□□□ -0.58
VAPB-203ENST00000463370 LIFP15018 202 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 SRMP19623 302 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 DPP4P27487 766 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 KIR3DL2P43630 455 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 SOX2P48431 317 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 DNASE1L1P49184 302 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 MAP2K6P52564 334 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 YIF1BQ5BJH7 314 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 SLC22A10Q63ZE4 541 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 TMEM81Q6P7N7 255 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 ARMC10Q8N2F6 343 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 UBE2J2Q8N2K1 259 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 GDPD1Q8N9F7 314 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 OR5AK2Q8NH90 309 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 TRMT10AQ8TBZ6 339 aaKnown RBP11.46□□□□□ -0.58
VAPB-203ENST00000463370 OR8B4Q96RC9 309 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 P4HTMQ9NXG6 502 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 CLEC4AQ9UMR7 237 aa11.46□□□□□ -0.58
VAPB-203ENST00000463370 A0A0G2JMP0 313 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 A0A0X1KG70 313 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 A0A1W2PNV4 684 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 TRABD2BA6NFA1 517 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 SNPHO15079 494 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 RAD1O60671 282 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 ARL6IP5O75915 188 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 CRABP1P29762 137 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 PTGS2P35354 604 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 GLO1Q04760 184 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 SSPNQ14714 243 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 WDR38Q5JTN6 314 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 LINC00346Q8IVM7 164 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 SLC26A10Q8NG04 563 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 OR4M2Q8NGB6 313 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 OR4M1Q8NGD0 313 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 ACOT12Q8WYK0 555 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 ZPBPQ9BS86 351 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 ABHD6Q9BV23 337 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 FANCFQ9NPI8 374 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 TMEM9BQ9NQ34 198 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 EXTL2Q9UBQ6 330 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 TMEM14AQ9Y6G1 99 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 A6NIZ1 184 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 NOTOA8MTQ0 251 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 IGHEP01854 428 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 RAB40ALP0C0E4 278 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 DEFA1P59665 94 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 DEFA3P59666 94 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 RAP1BP61224 184 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 RAP1AP62834 184 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 MFGE8Q08431 387 aaPredicted RBP11.45□□□□□ -0.58
VAPB-203ENST00000463370 SELENBP1Q13228 472 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 CAMK2DQ13557 499 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 EIF2B1Q14232 305 aaKnown RBP11.45□□□□□ -0.58
VAPB-203ENST00000463370 SLC17A1Q14916 467 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 STPG1Q5TH74 334 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 OR7E24Q6IFN5 339 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 CORO6Q6QEF8 472 aa11.45□□□□□ -0.58
VAPB-203ENST00000463370 PAMR1Q6UXH9 720 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms