RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 DUSP22Q9NRW4 184 aa14.52□□□□□ -0.08
SMC4-204ENST00000462787 SCN7AQ01118 1682 aa14.52□□□□□ -0.08
SMC4-204ENST00000462787 MAGEB4O15481 346 aaPredicted RBP14.52□□□□□ -0.09
SMC4-204ENST00000462787 SULT1A3P0DMM9 295 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 SULT1A4P0DMN0 295 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 CPN1P15169 458 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 FOLR1P15328 257 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 MORN1Q5T089 497 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 FCRL6Q6DN72 434 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 OR2W3Q7Z3T1 314 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 MMP21Q8N119 569 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 OR1J1Q8NGS3 322 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 SGPP1Q9BX95 441 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 PLA2G12AQ9BZM1 189 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 PCDHB10Q9UN67 800 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 B3GALT5Q9Y2C3 310 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.52□□□□□ -0.09
SMC4-204ENST00000462787 URGCP-MRPS24S4R325 110 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 CBX7O95931 251 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 ZNF728P0DKX0 622 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 SNRPEP62304 92 aaKnown RBP14.52□□□□□ -0.09
SMC4-204ENST00000462787 ZNF750Q32MQ0 723 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 C5orf46Q6UWT4 87 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 KLHDC7BQ96G42 594 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 MICAL3Q7RTP6 2002 aa14.52□□□□□ -0.09
SMC4-204ENST00000462787 A0A0U1RQK1 487 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 SERPINA7P05543 415 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 ACRP10323 421 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 NME1P15531 152 aaKnown RBP14.51□□□□□ -0.09
SMC4-204ENST00000462787 HOXB9P17482 250 aaPredicted RBP14.51□□□□□ -0.09
SMC4-204ENST00000462787 ATF1P18846 271 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 ZNF93P35789 620 aaPredicted RBP14.51□□□□□ -0.09
SMC4-204ENST00000462787 SNRPNP63162 240 aaKnown RBP14.51□□□□□ -0.09
SMC4-204ENST00000462787 MRPS34P82930 218 aaKnown RBP14.51□□□□□ -0.09
SMC4-204ENST00000462787 DUSP8Q13202 625 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 COMMD1Q8N668 190 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 SIRT6Q8N6T7 355 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 OR13C8Q8NGS7 320 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 TSACCQ96A04 125 aaPredicted RBP14.51□□□□□ -0.09
SMC4-204ENST00000462787 MARVELD3Q96A59 401 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 OR1F2PQ96R84 312 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 ZNF251Q9BRH9 671 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 METTL9Q9H1A3 318 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 C1orf198Q9H425 327 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 LDAHQ9H6V9 325 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 EMC9Q9Y3B6 208 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 PRAMEF27A3QJZ7 478 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 F5H5K5 113 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 PLPP2O43688 288 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 SDHAP31040 664 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 SNU13P55769 128 aaKnown RBP14.51□□□□□ -0.09
SMC4-204ENST00000462787 OR7A5Q15622 319 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 EEF1A1P5Q5VTE0 462 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 PRAMEF9Q5VWM5 478 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 ZNF626Q68DY1 528 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 OR5M8Q8NGP6 311 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 OR6S1Q8NH40 331 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 LMX1AQ8TE12 382 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 Q96M85 177 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 DERL3Q96Q80 235 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 EXOGQ9Y2C4 368 aaKnown RBP14.51□□□□□ -0.09
SMC4-204ENST00000462787 C9J4A7 227 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 RNASEK-C17orf49H0YIS7 233 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 ERVH48-1M5A8F1 160 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 NQO2P16083 231 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 HIST1H1CP16403 213 aaKnown RBP14.51□□□□□ -0.09
SMC4-204ENST00000462787 BLVRBP30043 206 aaPredicted RBP14.51□□□□□ -0.09
SMC4-204ENST00000462787 LGI3Q8N145 548 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 CASD1Q96PB1 797 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 APOOQ9BUR5 198 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 PLEKHA2Q9HB19 425 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 IL20Q9NYY1 176 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 KCNIP1Q9NZI2 227 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 NME2P1O60361 137 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 SMIM6P0DI80 62 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 TMEM229BQ8NBD8 167 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 CCNL2Q96S94 520 aaPredicted RBP14.51□□□□□ -0.09
SMC4-204ENST00000462787 BARHL1Q9BZE3 327 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 PLEKHA3Q9HB20 300 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 OR52A1Q9UKL2 312 aa14.51□□□□□ -0.09
SMC4-204ENST00000462787 OMGP23515 440 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 NFYBP25208 207 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 RAB38P57729 211 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 PJVKQ0ZLH3 352 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 GPNMBQ14956 572 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 NSDHLQ15738 373 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 TAF9Q16594 264 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 OR2G3Q8NGZ4 309 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 RSPRY1Q96DX4 576 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 SLC35A4Q96G79 324 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 SDF2Q99470 211 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 ENKD1Q9H0I2 346 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 CLDND1Q9NY35 253 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 CGGBP1Q9UFW8 167 aaPredicted RBP14.5□□□□□ -0.09
SMC4-204ENST00000462787 ZNF98A6NK75 572 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 TK1P04183 234 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 CD37P11049 281 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 CLINT1Q14677 625 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 LDLRAD1Q5T700 205 aa14.5□□□□□ -0.09
SMC4-204ENST00000462787 TP53I13Q8NBR0 393 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms