RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 STEAP2Q8NFT2 490 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 OR2M3Q8NG83 312 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 OR1J1Q8NGS3 322 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 DTNBP1Q96EV8 351 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 MUS81Q96NY9 551 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 EFCAB11Q9BUY7 163 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 CAPS2Q9BXY5 557 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 DDX47Q9H0S4 455 aaKnown RBP4.08□□□□□ -1.76
COPS3-204ENST00000462236 GLRX2Q9NS18 164 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 FAIMQ9NVQ4 179 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 ADPRHL2Q9NX46 363 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 LYARQ9NX58 379 aaKnown RBP4.08□□□□□ -1.76
COPS3-204ENST00000462236 DNAH9Q9NYC9 4486 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 KLRF1Q9NZS2 232 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 PHF11Q9UIL8 331 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 CES1P1Q9UKY3 287 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 SPACA6W5XKT8 324 aa4.08□□□□□ -1.76
COPS3-204ENST00000462236 DNAH7Q8WXX0 4024 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 IGLV3-32A0A0A0MS00 114 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 NDUFS8O00217 210 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 PGRMC2O15173 223 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 PCDH7O60245 1069 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 EEDO75530 441 aaKnown RBP4.07□□□□□ -1.76
COPS3-204ENST00000462236 ZNF432O94892 652 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 MBD3O95983 291 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 TGFAP01135 160 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 TSHBP01222 138 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 TACSTD2P09758 323 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 CCDC166P0CW27 439 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 CT45A8P0DMV1 189 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 CT45A9P0DMV2 189 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 CPMP14384 443 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 PTNP21246 168 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 DRD5P21918 477 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 TCEA1P23193 301 aaKnown RBP4.07□□□□□ -1.76
COPS3-204ENST00000462236 CA6P23280 308 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 AGTR1P30556 359 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 TLX1P31314 330 aaPredicted RBP4.07□□□□□ -1.76
COPS3-204ENST00000462236 SSR2P43308 183 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 PPICP45877 212 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 EFNA4P52798 201 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 CDH11P55287 796 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 HERV-K104P61576 105 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 ACSM1Q08AH1 577 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 SNX1Q13596 522 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 CUL3Q13618 768 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 GANABQ14697 944 aaKnown RBP4.07□□□□□ -1.76
COPS3-204ENST00000462236 RAB35Q15286 201 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 TGFBIQ15582 683 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 TSC22D1Q15714 1073 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 KCTD19Q17RG1 926 aaPredicted RBP4.07□□□□□ -1.76
COPS3-204ENST00000462236 CT45A2Q5DJT8 189 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 WDR38Q5JTN6 314 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 CORO6Q6QEF8 472 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 B3GLCTQ6Y288 498 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 ZBTB49Q6ZSB9 765 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 Q6ZSR9 355 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 CHMP1BQ7LBR1 199 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 PEX26Q7Z412 305 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 UBQLNLQ8IYU4 475 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 ARHGAP24Q8N264 748 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 RNF175Q8N4F7 328 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 C3orf56Q8N813 242 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 OR7G3Q8NG95 312 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 KIF18AQ8NI77 898 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 EXT2Q93063 718 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 CMTM7Q96FZ5 175 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 BTBD9Q96Q07 612 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 DHRS9Q9BPW9 319 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 POTEKPQ9BYX7 375 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 OR51B5Q9H339 312 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 CDH20Q9HBT6 801 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 XAB2Q9HCS7 855 aaKnown RBP4.07□□□□□ -1.76
COPS3-204ENST00000462236 MYNNQ9NPC7 610 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 NGBQ9NPG2 151 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 FANCFQ9NPI8 374 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 IARS2Q9NSE4 1012 aaKnown RBP4.07□□□□□ -1.76
COPS3-204ENST00000462236 C20orf96Q9NUD7 363 aaPredicted RBP4.07□□□□□ -1.76
COPS3-204ENST00000462236 DNAJC11Q9NVH1 559 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 MAT2BQ9NZL9 334 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 CFL2Q9Y281 166 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 AP4B1Q9Y6B7 739 aa4.07□□□□□ -1.76
COPS3-204ENST00000462236 PRR23D1E9PI22 279 aaPredicted RBP4.06□□□□□ -1.76
COPS3-204ENST00000462236 ATP6V0E1O15342 81 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 KIAA0513O60268 411 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 FADS1O60427 444 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 STK16O75716 305 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 SLC22A3O75751 556 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 LY6HO94772 140 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 ATP1B1P05026 303 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 FAM58BPP0C7Q3 252 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 PRR23D2P0DMB1 279 aaPredicted RBP4.06□□□□□ -1.76
COPS3-204ENST00000462236 COX5AP20674 150 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 GIFP27352 417 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 SERPINB1P30740 379 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 KCNJ1P48048 391 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 HILS1P60008 231 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 TPM4P67936 248 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 SARNPP82979 210 aaKnown RBP4.06□□□□□ -1.76
COPS3-204ENST00000462236 PLCXD2Q0VAA5 305 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms