RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 IGHV2OR16-5A0A0B4J2B6 119 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 TRBV4-1A0A0J9YWV2 114 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 A6NIZ1 184 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 CDC42EP2O14613 210 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 PDE5AO76074 875 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 GADD45GO95257 159 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 SLC2A10O95528 541 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 IGHMP01871 453 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 PCSK6P29122 969 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 RAP1BP61224 184 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 SNRPD2P62316 118 aaKnown RBP13.34□□□□□ -0.27
VARS-219ENST00000461328 RAB1AP62820 205 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 RAP1AP62834 184 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 PPP2R2BQ00005 443 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 FMODQ06828 376 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 ZBED5Q49AG3 693 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 TMEM53Q6P2H8 277 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 CLEC2AQ6UVW9 174 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 DNM1P46Q6ZS02 220 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 RINLQ6ZS11 566 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 SKA3Q8IX90 412 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 ARHGAP24Q8N264 748 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 IL17RDQ8NFM7 739 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 BCAS4Q8TDM0 211 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 HDAC2Q92769 488 aaKnown RBP13.34□□□□□ -0.27
VARS-219ENST00000461328 MS4A3Q96HJ5 214 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 TSPAN32Q96QS1 320 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 SH3GL3Q99963 347 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 ALG12Q9BV10 488 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 MRPL13Q9BYD1 178 aaKnown RBP13.34□□□□□ -0.27
VARS-219ENST00000461328 B3GNT2Q9NY97 397 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 FBXL3Q9UKT7 428 aa13.34□□□□□ -0.27
VARS-219ENST00000461328 ZNF346Q9UL40 294 aaKnown RBP13.34□□□□□ -0.27
VARS-219ENST00000461328 VSTM5A8MXK1 200 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 XKRYO14609 159 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 STAMBPO95630 424 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 SEMG1P04279 462 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 PATE4P0C8F1 98 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 ATP6V1B2P21281 511 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 SERPINF1P36955 418 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 DSCR9P59020 149 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 ERVK-25P63136 954 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 GALK2Q01415 458 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 SNTB2Q13425 540 aaKnown RBP13.33□□□□□ -0.28
VARS-219ENST00000461328 DAG1Q14118 895 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 SLC36A2Q495M3 483 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 KRT80Q6KB66 452 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 TMPRSS11FQ6ZWK6 438 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 SLC16A14Q7RTX9 510 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 ZDHHC21Q8IVQ6 265 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 RSRC1Q96IZ7 334 aaKnown RBP13.33□□□□□ -0.28
VARS-219ENST00000461328 RBP7Q96R05 134 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 SEPHS2Q99611 448 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 KCNN2Q9H2S1 579 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 MUC13Q9H3R2 512 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 DENND2DQ9H6A0 471 aaPredicted RBP13.33□□□□□ -0.28
VARS-219ENST00000461328 FAM53CQ9NYF3 392 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 ZNF224Q9NZL3 707 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 GRHPRQ9UBQ7 328 aa13.33□□□□□ -0.28
VARS-219ENST00000461328 NSD1Q96L73 2696 aaPredicted RBP13.33□□□□□ -0.28
VARS-219ENST00000461328 TP53P04637 393 aaPredicted RBP13.32□□□□□ -0.28
VARS-219ENST00000461328 CD14P08571 375 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 OR4A8P0C604 315 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 RRM2P31350 389 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 GUCA1AP43080 201 aaPredicted RBP13.32□□□□□ -0.28
VARS-219ENST00000461328 RAB39AQ14964 217 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 SEC23BQ15437 767 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 HIST3H3Q16695 136 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 MTX3Q5HYI7 312 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 C10orf128Q5T292 105 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 DPPA2Q7Z7J5 298 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 DHFR2Q86XF0 187 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 LRRC18Q8N456 261 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 ZNF525Q8N782 197 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 LRRC75AQ8NAA5 344 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 NUP37Q8NFH4 326 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 FNDC8Q8TC99 324 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 CCDC124Q96CT7 223 aaKnown RBP13.32□□□□□ -0.28
VARS-219ENST00000461328 DHRS1Q96LJ7 313 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 ZNF570Q96NI8 536 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 KCNK17Q96T54 332 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 SMURF2Q9HAU4 748 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 CCNB1IP1Q9NPC3 277 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 ACTR3BQ9P1U1 418 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 TMCC3Q9ULS5 477 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 PRPF19Q9UMS4 504 aaKnown RBP13.32□□□□□ -0.28
VARS-219ENST00000461328 ADAM18Q9Y3Q7 739 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 SPEF1Q9Y4P9 236 aa13.32□□□□□ -0.28
VARS-219ENST00000461328 ZANQ9Y493 2812 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 ALPK2Q86TB3 2170 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 IGHV4-30-2A0A087WSY4 118 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 A0A1W2PPL8 197 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 SH3PXD2BA1X283 911 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 UNC119BA6NIH7 251 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 INAFM1C9JVW0 142 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 H7C1C5 153 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 OR10H3O60404 316 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 NDUFB2O95178 105 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 ZNF14P17017 642 aaPredicted RBP13.31□□□□□ -0.28
VARS-219ENST00000461328 NPR2P20594 1047 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms