RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 PIGTQ969N2 578 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 BOD1Q96IK1 185 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 MPP4Q96JB8 637 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 PIP5K1AQ99755 562 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 ZNF426Q9BUY5 554 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 LINC00470Q9BZP3 86 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 SLC19A3Q9BZV2 496 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 POLR2J2Q9GZM3 115 aaKnown RBP6.04□□□□□ -1.44
NUP50-212ENST00000461194 FAM107BQ9H098 131 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 POLR2J3Q9H1A7 115 aaKnown RBP6.04□□□□□ -1.44
NUP50-212ENST00000461194 ESRP2Q9H6T0 727 aaKnown RBP6.04□□□□□ -1.44
NUP50-212ENST00000461194 UBTD1Q9HAC8 227 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 BEX4Q9NWD9 120 aaPredicted RBP6.04□□□□□ -1.44
NUP50-212ENST00000461194 MRPL39Q9NYK5 338 aaKnown RBP6.04□□□□□ -1.44
NUP50-212ENST00000461194 SEC14L4Q9UDX3 406 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 RCE1Q9Y256 329 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 SH3GLB1Q9Y371 365 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 SLC25A15Q9Y619 301 aa6.04□□□□□ -1.44
NUP50-212ENST00000461194 LRRN3E7EW58 273 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 MS4A18H0YCH9 400 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 DYNC1I1O14576 645 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 HS3ST1O14792 307 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 TRAF3IP2O43734 574 aaPredicted RBP6.03□□□□□ -1.44
NUP50-212ENST00000461194 AKAP8O43823 692 aaKnown RBP6.03□□□□□ -1.44
NUP50-212ENST00000461194 TMCC2O75069 709 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 UPK3AO75631 287 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 KRT33AO76009 404 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 OR5F1O95221 314 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 NQO1P15559 274 aaKnown RBP6.03□□□□□ -1.44
NUP50-212ENST00000461194 TNFRSF1BP20333 461 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 CBLP22681 906 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 NUDT2P50583 147 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 SLC7A2P52569 658 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 CLDN17P56750 224 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 RAB1AP62820 205 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 SELENOWP63302 87 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 PMS2P3Q13401 168 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 C1DQ13901 141 aaKnown RBP6.03□□□□□ -1.44
NUP50-212ENST00000461194 ZNF74Q16587 644 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 MS4A18Q3C1V0 323 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 LRRC23Q53EV4 343 aaPredicted RBP6.03□□□□□ -1.44
NUP50-212ENST00000461194 CYBRD1Q53TN4 286 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 C9orf135Q5VTT2 229 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 TTC33Q6PID6 262 aaPredicted RBP6.03□□□□□ -1.44
NUP50-212ENST00000461194 NHLRC1Q6VVB1 395 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 PIGWQ7Z7B1 504 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 UEVLDQ8IX04 471 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 LRRC75A-AS1Q8N1F1 130 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 ZNF611Q8N823 705 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 WDR31Q8NA23 367 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 OR52N5Q8NH56 324 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 LILRB1Q8NHL6 650 aaPredicted RBP6.03□□□□□ -1.44
NUP50-212ENST00000461194 IGFBPL1Q8WX77 278 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 AKAP1Q92667 903 aaKnown RBP eCLIP6.03□□□□□ -1.44
NUP50-212ENST00000461194 MOGAT1Q96PD6 335 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 CCL19Q99731 98 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 PRSS27Q9BQR3 290 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 OBP2BQ9NPH6 170 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 SLC17A5Q9NRA2 495 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 NPAP1Q9NZP6 1156 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 ABCD2Q9UBJ2 740 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 SLC7A7Q9UM01 511 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 MYRFQ9Y2G1 1151 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 RNF115Q9Y4L5 304 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 FREM1Q5H8C1 2179 aa6.03□□□□□ -1.44
NUP50-212ENST00000461194 PRRC2AP48634 2157 aaKnown RBP6.02□□□□□ -1.45
NUP50-212ENST00000461194 A0A1W2PR80 420 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 ZNF785A8K8V0 405 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 ZNF587BE7ETH6 402 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 RPL36A-HNRNPH2H7BZ11 118 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 CXCR6O00574 342 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 NME4O00746 187 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 PLPP3O14495 311 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 CLOCKO15516 846 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 GPANK1O95872 356 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 CH25HO95992 272 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 HPRP00739 348 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 IGF2P01344 180 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 THRBP10828 461 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 HLA-DOBP13765 273 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 PTNP21246 168 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 NR4A1P22736 598 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 AHCYP23526 432 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 PAX7P23759 505 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 PTAFRP25105 342 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 RBM34P42696 430 aaKnown RBP6.02□□□□□ -1.45
NUP50-212ENST00000461194 OR1E2P47887 323 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 GSK3BP49841 420 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 TAS2R41P59536 307 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 PRPS1P60891 318 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 PSME3P61289 254 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 BSPH1Q075Z2 132 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 LGALS3BPQ08380 585 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 PUDPQ08623 228 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 ZP4Q12836 540 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 TBRG1Q3YBR2 411 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 ZNF672Q499Z4 452 aaPredicted RBP6.02□□□□□ -1.45
NUP50-212ENST00000461194 HMBOX1Q6NT76 420 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 KLHL17Q6TDP4 642 aa6.02□□□□□ -1.45
NUP50-212ENST00000461194 TMEM108Q6UXF1 575 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms